Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00381 ATGAATTCCAACCAAACCATCTTCTCTTCCGCCACGCTCATGCTCAGCATCCCTCTCTCACGACGTGAGATCTACAACGTGTGCATGGATCAGCCCATGAATATTATCTCCGATGGCATTTGGAACCATCCCAATGGTTCATCGCCCACACAATCTGCATACACCATGCTTCAGATTCAAATGGTTACAATCTTTGCCGTCACGCAAGCCTTTCATTTCATTCTCAAGAAATTTGGGTTCCCCTATTTCGTTTCACAAGTCATGGCTGGTTTTCTGCTAGGGCCAACAATTCCGACAGGACCATTTGAACAGTACAAGAAGATGTTGTTCCCTTTTGGGAGTGCTGATATCCTGAACACAGTGTCAGCGTTAGGGTTCTCGTTCTTCCTCTTCATAACCTCAGTGCAAATGGACCTGAGCTTGATCACGAAAACGGGGAAGAAGGCATGGGTCATCGCACTTTCCTCCTACTTCGTCTCCATAGCTATTGGGTTTACCGTCATGAGCATGGTGTCTTCTCAGCTGGCACAAATAAATGATGATTATGACAGTTTCTCCAGCTTGCCAATGGTAATCGTAACTCAGGGCGGCGTTTCCTTTGCCGTCGTCTCCACCATGCTCAACGACCTTGGAATCCTCAACTCCGAACTCGGTCGCCTTGCCCTCTCCACAGCTTTCGTCAATGACCTAACTGGTGGAATCGCAGCAGGGTTCGGCGCTGACTATGTGAAAAGCGTGCAGTTGGGAGTTCCTAGTCTAATCACAAACGTAGTGGTTTTTTTTGTTTACCTAATCTGCATTCCACTGATTGGGAGACCGGCGATGAAGTGGATTGTGAAGAACACCCCAGAAGGGAAACCCGTGAGCAAGATATACATCTATTCCATCATAGTGTCGTTTCTGGGATTAGGGTTCTTCGCAGGGTATTTCAACCAACCCTTCTTAGTAGGGGCTATTATTTTAGGCCTTGCAGTCCCTGAAGGTCCTCCATTGGGGTCAGAATTGGTTTCCCAACTTGAGCTGTTTAGCAGTTGGTTCCTCACCTCAATTTTTGTCACATGTTGCACCATGAAGGTGGATCTCAAAGCCTGTGTACCTTTATCCTTCTTTGTGGTCGTGTTCCTCTTCATTCTATTAGCCCAATTGATTAAGATACTATTGTGCATGGGAATTTGCGGCTACTGTAAAATGCCCTTCTCTGATGGTTTCTGCCTTGCTCTCATTTTGAGCACCAAAGGTGTCGTGGATGTCTGCTCCTATGTCCTCATGTTCGATTCAATGGCACAAAACAAAAAAGTAATAGGTGTTCTGATCGTGTCGGTGTTGGTTCTGGGAACAACTTCGAAGATTGGTGTGAAGGCATTGTATGACCCTTCAAGGAAATACGCGGGGTATCAAAAAAGGAACATCATGAACTTGAAACAGAATCATGAGCTTAGGATTGTCGCATGCATCCACAAGACATACCAAGTGATTCACATGAAAAACGTGCTCCAGCTGTGTTCTCCTTGTCCAGAGAACACACTGGTGGCAGATATTGTGCATCTGATGGAGCTGGTGGGAAGGTCCACTCCCATTTTCATCGCACACAGACTTCAGCAAAAGGTGGGGTCCTCCTACAACTACTCCGGGGAACTCATCGTGACCTTTGACCTTTTTGAACGTGACTATGCGGGTTGTGCCACCGCCAACACCTACACTGCCATATCCCCAATGGCACTGATGCATGAAGATGTGTGTCACCTTGCACTGGACAAAAACGCAGCCATTATAATCCTTCCATTTCATGTGAAATGGGGAGGGGATGGTTCCATTGAGTTAGAGGACAGCAACATAAGGTCATTTAACTCAAGGGTCTTGGAAAGGGCACCTTGCTCCATTGGGATTCTTCTGACACGTGGCTCTGCTGGGTTCAGCATGGCAAACTACAAAGTGGCAATGGTTTTCCTGGGAGGACCCGATGACAGAGAGGCCTTGTGCTTGGCTAGGAGGTTCACGAAAAACCTCGGCAACAAGTTGTTTGTGTATAGGTTGGTCGCATACGACCGTGATATGTCGAATTGGGAAGACATGATTGATGACGAGGAGTTGAGGGAGGTGCGTGGAGCCTATGGAAAACTGGAAAATGTGACATACGAAGAGCGCACCATAGAAGATGCATCTGAGACAACGGTTTTCCTCAAAGACATAGCCAACAAATTTGATTTCATCGTTGTCGGAAGACGCTACGGAATGAGATCTTCTCAAACCTATGGGTTGGAAAATTGGACTGAATATTCGGAGCTGGGAGTGATTGGTGATTTGCTTGCTTCACCTGATATGGAGACTAGGGCTTCTGTTTTGGTTATACAACAACAGTCTACGGCTGCCTCATGA 2376 0.4672 MNSNQTIFSSATLMLSIPLSRREIYNVCMDQPMNIISDGIWNHPNGSSPTQSAYTMLQIQMVTIFAVTQAFHFILKKFGFPYFVSQVMAGFLLGPTIPTGPFEQYKKMLFPFGSADILNTVSALGFSFFLFITSVQMDLSLITKTGKKAWVIALSSYFVSIAIGFTVMSMVSSQLAQINDDYDSFSSLPMVIVTQGGVSFAVVSTMLNDLGILNSELGRLALSTAFVNDLTGGIAAGFGADYVKSVQLGVPSLITNVVVFFVYLICIPLIGRPAMKWIVKNTPEGKPVSKIYIYSIIVSFLGLGFFAGYFNQPFLVGAIILGLAVPEGPPLGSELVSQLELFSSWFLTSIFVTCCTMKVDLKACVPLSFFVVVFLFILLAQLIKILLCMGICGYCKMPFSDGFCLALILSTKGVVDVCSYVLMFDSMAQNKKVIGVLIVSVLVLGTTSKIGVKALYDPSRKYAGYQKRNIMNLKQNHELRIVACIHKTYQVIHMKNVLQLCSPCPENTLVADIVHLMELVGRSTPIFIAHRLQQKVGSSYNYSGELIVTFDLFERDYAGCATANTYTAISPMALMHEDVCHLALDKNAAIIILPFHVKWGGDGSIELEDSNIRSFNSRVLERAPCSIGILLTRGSAGFSMANYKVAMVFLGGPDDREALCLARRFTKNLGNKLFVYRLVAYDRDMSNWEDMIDDEELREVRGAYGKLENVTYEERTIEDASETTVFLKDIANKFDFIVVGRRYGMRSSQTYGLENWTEYSELGVIGDLLASPDMETRASVLVIQQQSTAAS 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00381 791 PANTHER CATION/H + ANTIPORTER 28 787 - -
Viun6g00381 791 Pfam Sodium/hydrogen exchanger family 67 445 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Viun6g00381 791 Gene3D - 55 463 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00381 Viun-Chr6 10616789 10619866 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00381 22 786 Antiporter Super Family AT5G22900 34.719 1.29e-153 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00381 K26731 - gmx:100797272 1201.04