Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00379 ATGGAGGCGAACCAAACACTCTTCTCTTCAGTGACGTTATTGCACGAAGTGCCAGAGTTGGGATTTGAGGCCTACAATGTGTGCGTGCATCATCCAATGAAGATCATATCCGATGGCATATGGACTCAACATGGAAGTGCATTACCTACACAATATTCATACACAATGCTTGAGCTTCAAATAGTTATCATCTTCGTGGTCACGCAAGGCTTTCATTTCATTCTCAGTCGATTAGGGGTCCCTTATTTCGTTTCACAAGTCATGACAGGGTTTCTGATGGGGCCATCAATTCCGACAGGACCATTTGAAAAGTACAAGAAGATGCTGTTCCCGTTCGGGAGTCCAGACATCCTAAGCACACTGTCATCGTTGGGATACTCATTCTACCTGTTCCTGAACTCGGTGCAGATGGACCTAAGCTTGATCACGAAAACAGGGAGAAAGGCTTGGGTGATAGGGCTTTGCTGCTATACAATTCCCATATTGGTGGGGTGTGGGAGCATGGACTTTTTGAATTCCACGTGGGAGAGGATCCTCGGAGAGGACATTTCTATTTTGCCTGTGGTCTTCATATCTCATAGTAGTTGCTCCTTCGCTGTCATTTCATGGTTGCTCAATGACATCGGAATCCTCAACTCTGAACTCGGACGCCTCGCACTCTCCGCAGCTTTTGTCAACGATGTTGCAGGTGGACTGTGGGCAGGGATTGGTGCTGCATATTTTGGCAGACAGGACATGATGATGTCTATCCGTATTAGAAACGTTACGGGATTTCTTGCTTACGTAATGTTCATTCTTCTGATCGGTCGTCCTGCAATGAGGTGGATCGTGAAGAGGACCCCAGAAGGTAGATCGGTGAACAAGGCATACATCTACGCCATCATAGTAATGTTCTTGGGATTGGGCTACTTTGCCAAGACTTTCGGTGAACCCTTCTTAGTAGGAGCTGTTATTTTTGGTCTTGCAGTCCCCGAGGGTCCTCCTTTGGGCTCTGCACTCGTTACCCAACTTGAATTGTTCTCCAAGTGGTTCCTCTGCTCCATTTTTGTCACATGTGTCACCATGAAGGTCGATCTCACCAAATGTAACTCTCTCTCCTTCGTAATGGTCATTTCTGGTCTCATCATCATGGTGCATCTCGTTCGCTGGCTTCTCTGCATCGGAATTTGCAAATACTGTAAGATTCCCTTCAAGGATGGCTTTTGTCTTGCTCTCATTTTGAGCTGCAAAGGGGTTGTCGATATCTGCTCCTATCTCCTAGTCTACGATGCAATGGTGCAAAAGAGAATAGTAGTTGATGTTATGGTCGTCTCAGTGTTGGTCCTAGGTACAGCTTCGAGGTTTGGTGTGAAGGCATTGTACGACCCTTCAAGGAAATACGCAGGGTACCAGAGTAGGAACATCATGAGCTTGAAACACAGTGAGCTTCGGATAGTTGCATGCATCCACAAGCCATGGCACTCGGTTCACATCAAGAACGTGCTCGAGTTTTGCTCCCCGGCACCGGATAACACACTGGTGGCCGAAATTTTGCACCTCATGGAGCTAGTTGGAAGGTCCAATCCCATTTTTATTTCACACAAACTTCAGCAAAGTTCAGGATCATCATCTTACAACTATTCCGGGGAACTCATTGTAGCGTTTGACCTTTTCGAACGTGACTATGTTGGAGCTGTCACTGCCAACACCTACACTGCCATATCCCCAGCGATGTTCATGAATGAAGATGTGTGCAACCTTGCTTTGGACAAAAACGCAGCCCTTATAGTGCTTCCGTTCCATGTGAAATGGGGAGGGGATGGTTCAGTTGAGTCAGAGGATAGCAACATAAGGGCACTTAACGCCAGGATTTTAGACAGGGCACCTTGCTCTGTTGGGATTCTGGTGAACCGTGGCCCTAGCTTCAACTCAAGAAGAATAAGTGCGGCCATGGTTTTCTTGGGTGGACCTGATGATAGAGAGGCTTTGTGCTTGGCTAAGAGGTTTGCCAAAGATGTTGAGAATAGTTTGTTTGTGTTCAGGTTGATGGCACACGACAAAGATTCCTCGAATTGGGATCAAATGATTGATGATGAAGCGATGAGGGAAATAAGTGGAGCTCATGTTAATCTAGAGAATGTTAGATATCAAGAGATTACTATAGGAGATGCATCTCAGACAACGTTTCTCATCAAAGATATAGCCAACAAATTTGATTTTATTTTAGTTGGTAGACGCTATGGAGTTACATCTTCTCAGACCTATGGGTTGGAGCATTGGACTGAATATTCAGAGTTAGGGGTCATTGGTGATTTGCTTGCTTCACATGATGCAGATACTACGGCTTCAGTTTTGGTTGTGCAACAACAACCAACTCATGAAGACCACAGATAA 2373 0.4564 MEANQTLFSSVTLLHEVPELGFEAYNVCVHHPMKIISDGIWTQHGSALPTQYSYTMLELQIVIIFVVTQGFHFILSRLGVPYFVSQVMTGFLMGPSIPTGPFEKYKKMLFPFGSPDILSTLSSLGYSFYLFLNSVQMDLSLITKTGRKAWVIGLCCYTIPILVGCGSMDFLNSTWERILGEDISILPVVFISHSSCSFAVISWLLNDIGILNSELGRLALSAAFVNDVAGGLWAGIGAAYFGRQDMMMSIRIRNVTGFLAYVMFILLIGRPAMRWIVKRTPEGRSVNKAYIYAIIVMFLGLGYFAKTFGEPFLVGAVIFGLAVPEGPPLGSALVTQLELFSKWFLCSIFVTCVTMKVDLTKCNSLSFVMVISGLIIMVHLVRWLLCIGICKYCKIPFKDGFCLALILSCKGVVDICSYLLVYDAMVQKRIVVDVMVVSVLVLGTASRFGVKALYDPSRKYAGYQSRNIMSLKHSELRIVACIHKPWHSVHIKNVLEFCSPAPDNTLVAEILHLMELVGRSNPIFISHKLQQSSGSSSYNYSGELIVAFDLFERDYVGAVTANTYTAISPAMFMNEDVCNLALDKNAALIVLPFHVKWGGDGSVESEDSNIRALNARILDRAPCSVGILVNRGPSFNSRRISAAMVFLGGPDDREALCLAKRFAKDVENSLFVFRLMAHDKDSSNWDQMIDDEAMREISGAHVNLENVRYQEITIGDASQTTFLIKDIANKFDFILVGRRYGVTSSQTYGLEHWTEYSELGVIGDLLASHDADTTASVLVVQQQPTHEDHR 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00379 790 Pfam Sodium/hydrogen exchanger family 62 441 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Viun6g00379 790 Gene3D - 55 461 IPR038770 -
Viun6g00379 790 PANTHER CATION/H + ANTIPORTER 29 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00379 Viun-Chr6 10574607 10578518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00379 23 780 Antiporter Super Family AT3G44900 36.139 5.66e-147 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00379 K26731 - gmx:100797272 1112.83