Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00360 ATGGCCCACAGGCGTTGCCTCTTGATAAGAGGGAACCTCATGAATCGAAAGTGCTACCCGTCTTTCGGTTATGTTCTCCATAGTGATGAAGGGGAACGTGAATGCACTAGTGAAAAGTCGTCTTCAGCGGGGATTAGTAATTCTATCCAAAAAAGGATGTTTGGGAACTCAGTTGATGGACCAGTGAGGTGTTTTGCCTACACTGAACATAGAATGTATTCAAACAGATTCCTTTTTCCGAGCTCTGGATATAATTTATGTCGACATATGTCAACAGCTAATCCGGGTTCCGATAATATTGAAATAGTGACTGACATAGCAGATGTTCTCAAAGACAAAGCAATCGATGCTGTGAATTCTCAGGCTCCTATTCTTAAAGAAGTTGCAATTGCCTCTGCTGATTCTGTTTTACCTGTGAAGGCCTTGCAGTACATTATAGATGCCATGCATTCCTGCACTGGATTGAACTGGTGGGCAGCCATAGTTCTAACAACTCTCTTGATTCGAAGCGCAACAGTTCCACTCTTAATAAATCAACTTAAGGCCACTTCTAAGCTTACACTGATGAGGCCTCACATGGAAAAAATAAAGGAAGAGATGGAAGATAAGGCTATGGATCCCATTGCTGTTGCTGAAGGTCAGAAAAAAATGAAGATGCTATTTAAGGAATATGGTGCAAGTCCATTTACTCCATTGAAGGGGCTCTTTATTCAAGGTCCTGTCTTTATTAGTTTTTTCCTTGCGATAAGAAACATGGCTGAAAAGATGCCATCATTCAAGCATGGGGGAGCCTACTGGTTTGTTGATCTTACTACTCCAGATGCCTTGTACATTTTGCCAGTTCTGACTGCATTGACATTCTTAATAACAGTAGAGTGCAATATGCAAGAAGGCTTGGAAGGAAATCCAGCTGCTGCCACCATGAAAAAATTCTCGAGGGTTATTGCAATCCTTACAGTTCCTTTCACAATGGGATTTCCGAAGGCTATATTTTGTTACTGGATTACATCAAATTTGTTTTCACTTGGATATGGACTCGTTCTTAAAGCTCCTGGTGTAAAGAAAGCTTTGGGTATCCCCATAATACAGGAAGCAGCAGCCACCAGTGGTGCACAATCTCCCTCTTCTATATTTCCAGCACTGAAACAAGCTACAGCAGCAAGAATTGCACCAAAGTCATTGCCTGTTGAACCATCAAAACATCAACAGAGAAAGACATCTTCTGATGTCAATCAAAGACTAAAACGTTTAGAGAAACAAGTGAAAGGAAGAAAGAAAAACAAGAACTGA 1290 0.4101 MAHRRCLLIRGNLMNRKCYPSFGYVLHSDEGERECTSEKSSSAGISNSIQKRMFGNSVDGPVRCFAYTEHRMYSNRFLFPSSGYNLCRHMSTANPGSDNIEIVTDIADVLKDKAIDAVNSQAPILKEVAIASADSVLPVKALQYIIDAMHSCTGLNWWAAIVLTTLLIRSATVPLLINQLKATSKLTLMRPHMEKIKEEMEDKAMDPIAVAEGQKKMKMLFKEYGASPFTPLKGLFIQGPVFISFFLAIRNMAEKMPSFKHGGAYWFVDLTTPDALYILPVLTALTFLITVECNMQEGLEGNPAAATMKKFSRVIAILTVPFTMGFPKAIFCYWITSNLFSLGYGLVLKAPGVKKALGIPIIQEAAATSGAQSPSSIFPALKQATAARIAPKSLPVEPSKHQQRKTSSDVNQRLKRLEKQVKGRKKNKN 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00360 429 Pfam 60Kd inner membrane protein 157 347 IPR028055 -
Viun6g00360 429 NCBIfam membrane protein insertase YidC 156 345 IPR028055 -
Viun6g00360 429 CDD 5TM_Oxa1-like 154 351 - -
Viun6g00360 429 MobiDBLite consensus disorder prediction 392 429 - -
Viun6g00360 429 MobiDBLite consensus disorder prediction 398 417 - -
Viun6g00360 429 Coils Coil 400 420 - -
Viun6g00360 429 PANTHER OXA1 111 400 IPR001708 GO:0016020|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00360 Viun-Chr6 9864352 9872928 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00360 160 428 Chloroplast and Mitochondria Gene Families AT2G28800 23.322 6.64e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00360 K03217 - gmx:100787806 727.628