Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00338 ATGAATCTTTGTTGTTGTGTGCAGGGTTTCAAGAAGGTAGTTGTTGATAGGTGGGAGTTCGCGAATGAGTACTTCAAAAAAGGAGCTAAGCACCTTTTGTGTGAAATACAGAGGAGAAAAACACCTCAGCAACATCACCAACTCTACCTTGACCAACCACCATCCCAGATTCTTCAACAAGATGAAACTCTATGCTGGCTTGACACTCCTCTTTCATCTCCAAAACCAGACACAGACATTCTAATAGCCCTTTCTGAAGACAACCAAAGACTAAGGAGAAAGAACTTCATGCTCTTGTCGGAACTTGCTCACATGAAGACTTTGTACAATGACATCATATATTTCATACAAAACCATGTAAAACCGCCACCACCATCCTTTGAACAGAGAATTCCAAAGCTGGTGGATAAGTCCTTGTTCACTTCTTCCGAAGAATCAAATAGTTCTGTGAAGCTCTTTGGGGTCCTTCTGAGTGGCAGAAAGAGATCGAACCCAGATAACATCAATCGATGA 513 0.4172 MNLCCCVQGFKKVVVDRWEFANEYFKKGAKHLLCEIQRRKTPQQHHQLYLDQPPSQILQQDETLCWLDTPLSSPKPDTDILIALSEDNQRLRRKNFMLLSELAHMKTLYNDIIYFIQNHVKPPPPSFEQRIPKLVDKSLFTSSEESNSSVKLFGVLLSGRKRSNPDNINR 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00338 170 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 9 137 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00338 Viun-Chr6 8800752 8806327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00338 9 126 HSF AT1G46264 51.724 5.57e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00338 K09419 - gmx:100806150 254.218