Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00313 ATGGCAGCATGTTTGAATCCACCTAGGTTATCTAGCACTGAAGATGACTCTGTCATACTCTTCTCAACTTCTAATTCTCCGGAAGAGTCCATTAGTGCTTCTTCTTCCTCTTTCCACCACTCACCGCCACCATCACAGCAACAATTCAGAGCTGCATATAAACTTTCTGTGAGAAATCTCTCCTACACTTTGCAGCCTCACAAGACCACTTCCTTTTCATTTTGTCATCAGAGTAAAAAACCAGAGCCCTTGAATATACTCAACTCAATCTCTTTTATAGCCAGAAGTTCTGAGATTGTTGCTGTGGCTGGTCCTAGTGGAACAGGAAAGTCTACCCTTCTGCGAATCGTGGCAGGAAGGGTAAAAGATGAAGACTTTGATCCTAAAAGCATTTCAATCAATGATCACCCTATGACTAGTGCAGCTCAGTTGAGAAAGACATGTGGGTTTGTGGCACAAGAGGACAATTTGCTTCCTATGCTGACTGTGAGAGAAACTTTGCTGTTCAGTGCAAAGTTCAGGCTAAAAGAAATGACCCCAAAAGATAGAGAGTTGAGGGTAGAAAGCTTGTTGCAAGAGCTAGGACTTTCACATGTTGCTGATAGTTTTGTTGGGGATGAAGAGAATAGAGGGATATCTGGTGGAGAGAGGAAAAGAGTGTCAATTGGAGTTGACATGATTCACAATCCTCCAATTTTGCTCCTAGATGAACCAACTTCAGGTCTAGACAGCACTTCAGCTTTGCAAGTCATAGAGTTACTGTCATCAATTGTTAAAGCAAAGCATAGGATAGTGGTTCTTTCAATCCACCAACCCAGCTATAGAATATTGCAGTATGTTTCCAAGTTCTTGATCCTCTCTCATGGTTCTGTTGTTCACAACGGTAGCCTAGAACAACTAGAGGAAACCATAAGTAAACTGGGACTCCAAATCCCAACACAGCTGAATGCTTTAGAATTCTCCATGGAAATTATACGAGGATTGGAAGATTTCAGTTCCAAATATGTGGAAAAGGAGCCATTTCCACACCTCATGTGGGCAGAAGAAGAAGAAAACTGTGGTGGAATCCAAATTGTGCAATCACAGTTTACCAAGGAAAGTTTTAGCAGTGTTTGCTATGCATACTTGGTGGAGATACTGTTTTTGTGCTCAAGATTTTGGAAGATCATTTACAGAACAAAACAACTTTTCTTGGCCAGAACAATGCAAGCACTGGTTGGTGGCTTTGGTCTGGGAAGTGTTTATATAAAGGTAACAAGGGATGAAGGAGGAGTTGCAGAAAGGTTAGGACTATTTGCATTCAGTCTTAGTTTTCTCCTCTCTTCAACAGTTGAAGCACTTCCAATATACCTTCAAGAGAGGAGTGTTTTGATGAAAGAAGCCTCAAGGGGAGCCTATAGGATTTCCTCTTACATGATAGCCAACACTTTTGTTTTCCTTCCTTTCTTGTTTGTGGTATCCACACTTTTTGCGGTTCCTGTGTACTGGCTTGTAGGCCTCAACCCTTCTCTTTCTGCCTTCACCTTCTTCACTTTTGTGGTGTGGCTCATTGTGCTCATGGCAAGTTCTCTTGTGCTCTTCTTAAGTGCAGTGTCTCCTGATTTCATTTCAGGGAACTCTCTCATCTGCACAGTTCTTGGAGCCTTCTTTCTGTTCTCAGGGTACTTCATTCCAAGGGAGAGTATCCCAAAGTATTGGCTTTTCATGTACTATGTGTCCCTCTATAGGTACCCTTTGGATGCACTCCTCACAAATGAGTACTGGAATGTTAGAAATGAGTGTTTCTCTCATCAAACAGAAGGATCACAGTGCTTGATCACAGGTTTTGATGTGTTGAAGAGTAGAGGACTTGAAAGGGATAACAGGTGGATCAATGTGGGAATAATGCTCGCATTCTTTGTGTTGTATCGTGTGCTTTGTTGGATAATTCTTGCAAGAAAGGCCTCCAAAACAACAATATAA 1962 0.4179 MAACLNPPRLSSTEDDSVILFSTSNSPEESISASSSSFHHSPPPSQQQFRAAYKLSVRNLSYTLQPHKTTSFSFCHQSKKPEPLNILNSISFIARSSEIVAVAGPSGTGKSTLLRIVAGRVKDEDFDPKSISINDHPMTSAAQLRKTCGFVAQEDNLLPMLTVRETLLFSAKFRLKEMTPKDRELRVESLLQELGLSHVADSFVGDEENRGISGGERKRVSIGVDMIHNPPILLLDEPTSGLDSTSALQVIELLSSIVKAKHRIVVLSIHQPSYRILQYVSKFLILSHGSVVHNGSLEQLEETISKLGLQIPTQLNALEFSMEIIRGLEDFSSKYVEKEPFPHLMWAEEEENCGGIQIVQSQFTKESFSSVCYAYLVEILFLCSRFWKIIYRTKQLFLARTMQALVGGFGLGSVYIKVTRDEGGVAERLGLFAFSLSFLLSSTVEALPIYLQERSVLMKEASRGAYRISSYMIANTFVFLPFLFVVSTLFAVPVYWLVGLNPSLSAFTFFTFVVWLIVLMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPRESIPKYWLFMYYVSLYRYPLDALLTNEYWNVRNECFSHQTEGSQCLITGFDVLKSRGLERDNRWINVGIMLAFFVLYRVLCWIILARKASKTTI 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00313 653 SMART AAA_5 96 298 IPR003593 GO:0016887
Viun6g00313 653 Pfam ABC-2 type transporter 379 587 IPR013525 GO:0016020|GO:0140359
Viun6g00313 653 Gene3D - 68 329 IPR027417 -
Viun6g00313 653 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 29 638 - -
Viun6g00313 653 Pfam ABC transporter 87 240 IPR003439 GO:0005524
Viun6g00313 653 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 55 313 IPR003439 GO:0005524
Viun6g00313 653 FunFam ABC transporter G family member 23 78 311 - -
Viun6g00313 653 Pfam ABC-2 type transporter 270 348 IPR043926 GO:0140359
Viun6g00313 653 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 76 305 IPR027417 -
Viun6g00313 653 ProSitePatterns ABC transporters family signature. 212 226 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00313 Viun-Chr6 8105084 8107319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00313 68 300 Calmodulin-binding Proteins AT2G36910 28.270 1.43e-13 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00313 K05681 - gmx:100783883 1099.35