Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00304 ATGAGCAACAATCCAACGCCAATCGCTAACCCAGATCCCGTTTCCTCCGAGGACCACCACATTGGCTCCTCCTCCCAACCGAGTCCACCACCGGCGCTACCACCACCACCACCACCACCCACCTCCACCGATCAGCATGTCACGAACCCATCTTCAAGTAAGCCACGTGGCAGGCCCCTAGGTTCCAAGAACAAGACAAAGTCCACCCCTCCGCCAGTTCCCCTACCAACTGAGCCCTCCGTAGAGCTTCTGGTTGTCACTGTGGAACCAAACAGGGACATCATGGAGTGCATCCTCGACATTGCTCACCAAGACCACGTGAGCCTCTCCATTATTAGTGCCATCGGAATGATCAACAGTGTAACCCTTCGCAACTCAACCCATGGTGCCCCATCCCTCGTCCTCCATGGGCCGTTCAAATTACTCTCCCTCACTGGCTCCTACTTGTACAAAAACGAATACACCCTTCACCTCGGAGCCACCCCTCCCCGCCCCTTATCCTTTGGAATCAACCTCTCCGCCGGTAACGGTGAAATCTTTACCGGCGTTGTCGGCGGCAGAGTCGTCGCAGGTGAGGGCGTCAGCTTGACAGTTTCCACCTTCAAGAATCCTCATATTTTGAAGTACGCTGCTGAAAGTGGAGAAGGTGATGAGAATAACAGCGACGATGATTAG 675 0.5452 MSNNPTPIANPDPVSSEDHHIGSSSQPSPPPALPPPPPPPTSTDQHVTNPSSSKPRGRPLGSKNKTKSTPPPVPLPTEPSVELLVVTVEPNRDIMECILDIAHQDHVSLSIISAIGMINSVTLRNSTHGAPSLVLHGPFKLLSLTGSYLYKNEYTLHLGATPPRPLSFGINLSAGNGEIFTGVVGGRVVAGEGVSLTVSTFKNPHILKYAAESGEGDENNSDDD 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00304 224 MobiDBLite consensus disorder prediction 1 26 - -
Viun6g00304 224 CDD DUF296 85 158 IPR005175 -
Viun6g00304 224 Pfam Plants and Prokaryotes Conserved (PCC) domain 84 202 IPR005175 -
Viun6g00304 224 ProSiteProfiles PPC domain profile profile. 78 221 IPR005175 -
Viun6g00304 224 MobiDBLite consensus disorder prediction 45 68 - -
Viun6g00304 224 SUPERFAMILY AF0104/ALDC/Ptd012-like 82 206 - -
Viun6g00304 224 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 41 219 IPR014476 GO:0003680
Viun6g00304 224 MobiDBLite consensus disorder prediction 1 78 - -
Viun6g00304 224 MobiDBLite consensus disorder prediction 27 44 - -
Viun6g00304 224 Gene3D - 81 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00304 Viun-Chr6 7806841 7807515 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00304 54 220 AT-hook Motif Nuclear Localized (AHL) Family AT1G14490 29.714 9.07e-15 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00304 - - vra:106779930 353.599