Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun6g00304 | ATGAGCAACAATCCAACGCCAATCGCTAACCCAGATCCCGTTTCCTCCGAGGACCACCACATTGGCTCCTCCTCCCAACCGAGTCCACCACCGGCGCTACCACCACCACCACCACCACCCACCTCCACCGATCAGCATGTCACGAACCCATCTTCAAGTAAGCCACGTGGCAGGCCCCTAGGTTCCAAGAACAAGACAAAGTCCACCCCTCCGCCAGTTCCCCTACCAACTGAGCCCTCCGTAGAGCTTCTGGTTGTCACTGTGGAACCAAACAGGGACATCATGGAGTGCATCCTCGACATTGCTCACCAAGACCACGTGAGCCTCTCCATTATTAGTGCCATCGGAATGATCAACAGTGTAACCCTTCGCAACTCAACCCATGGTGCCCCATCCCTCGTCCTCCATGGGCCGTTCAAATTACTCTCCCTCACTGGCTCCTACTTGTACAAAAACGAATACACCCTTCACCTCGGAGCCACCCCTCCCCGCCCCTTATCCTTTGGAATCAACCTCTCCGCCGGTAACGGTGAAATCTTTACCGGCGTTGTCGGCGGCAGAGTCGTCGCAGGTGAGGGCGTCAGCTTGACAGTTTCCACCTTCAAGAATCCTCATATTTTGAAGTACGCTGCTGAAAGTGGAGAAGGTGATGAGAATAACAGCGACGATGATTAG | 675 | 0.5452 | MSNNPTPIANPDPVSSEDHHIGSSSQPSPPPALPPPPPPPTSTDQHVTNPSSSKPRGRPLGSKNKTKSTPPPVPLPTEPSVELLVVTVEPNRDIMECILDIAHQDHVSLSIISAIGMINSVTLRNSTHGAPSLVLHGPFKLLSLTGSYLYKNEYTLHLGATPPRPLSFGINLSAGNGEIFTGVVGGRVVAGEGVSLTVSTFKNPHILKYAAESGEGDENNSDDD | 224 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun6g00304 | 224 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Viun6g00304 | 224 | CDD | DUF296 | 85 | 158 | IPR005175 | - | |
Viun6g00304 | 224 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 84 | 202 | IPR005175 | - | |
Viun6g00304 | 224 | ProSiteProfiles | PPC domain profile profile. | 78 | 221 | IPR005175 | - | |
Viun6g00304 | 224 | MobiDBLite | consensus disorder prediction | 45 | 68 | - | - | |
Viun6g00304 | 224 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 82 | 206 | - | - | |
Viun6g00304 | 224 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 41 | 219 | IPR014476 | GO:0003680 | |
Viun6g00304 | 224 | MobiDBLite | consensus disorder prediction | 1 | 78 | - | - | |
Viun6g00304 | 224 | MobiDBLite | consensus disorder prediction | 27 | 44 | - | - | |
Viun6g00304 | 224 | Gene3D | - | 81 | 218 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun6g00304 | Viun-Chr6 | 7806841 | 7807515 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun6g00304 | 54 | 220 | AT-hook Motif Nuclear Localized (AHL) Family | AT1G14490 | 29.714 | 9.07e-15 | 68.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun6g00304 | - | - | vra:106779930 | 353.599 |