Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00302 ATGGAATTTGACACTGTAGATGTTGCTAAGGCATTTTATATTGAGTATGCTAGACACATGGGCTTTAGCTCTAAAGTTGGCCCATATGGTCACTCTAAAATTGATGGGGAAAATTATAGGGAGTTTGTATGTGGTAGGGAAGGTTTAAGAAAAGGACTAAATGAAAGTTGCAATGCAATGATTAGGATCGAGCTAAAGGGTCAAAATAAATGGGTGGTAACAAAATTAGTGAAGGAGCATACTCATTCCCTGTTCAGTTCCAGTAAGGCATACAATAATCATCCAAGTAAGCATTTTTCTAGTGTTGGAAGGACAATGCCTGAAACTTATCAAGGAGTGGGTCTTGTTCCTAGTGGTGTTATGTATGTATCTATGGATGGGAATCGTGTTTCGAATCAGAATACTCGTGGGATGAAGAATATTCATACCACTCCTGCTGAACGAAGTCACCCGGTTAAAAATTCCTCATTGGTGAATTATACTGTTAGGCCTTCTTTGCCAAACCGGACATTGGGGAGGGATGCTCATAATCTGCTGGAGTACTTTAAAAAGATGCAGGCTGAGAATCCTGGTTTCTTCTATGCTATACAACTTGATGAAGACAATCGAATGTCTAATGTCTTCTGGGCAGATGCAAGATCAAGGACAGCATACAGTTATTACGGTGACACAGTTCATCTTGACACAACTTACAAAGTAAATCAATATAGAGTGCCATTTGCTCCTTTTACTGGGGTAAATCATCATGGTCAAATGGTTTTGTTTGGTTGTGCACTGCTTTTGGATGATTCTGAGGCATCTTATTTATGGCTGTTGAAGACATTTCTGACGGCAATGAATGATTGTCAGCCTGTCTCTATAACTACTGATCAAGATAGAGCCTTGCAGACAGCAGTTTCTCAAGTTCTCCCACAAACCCGCCACTGTATTAGCAAGTGGCATATCTTGAGAGAAGGTCAAGAAAAGTTGGCCCATGTATGTCTTGCACATCCAAATTTTCAGGTTGAACTTTATAATTGTATTAACTTGACAGAAACCATTGATGAGTTTGAGTCATTTTGGAATTGCATCATTGATAAATATGAACTCAGAAGAAATGATTGGCTTCAGTCATTATATAATGCTCGTGCTCATTGGGTTCCAGCATTCTTCCGCAGTTCGTTTTTTGCAGCACTCTCTCCTACTCAAGGTTTTGATGGTTCTTTTTTTGATGGTTATGTCAACCAACAGACGACATTGCCATTGTTCTTCAGGCAGTACGAAAGAGCTTTAGAGAGCTGGATTGAAAAGGAAATAGAAGCAGATTTTGAGACAGTTTGCACTACCCCAGTTTTGAAGACACCTTCACCAATGGAGAAACAGGTTGCTAATCTTTATACGAGAAAAATATTTTCCAAGTTTCAAGATGAGCTTGTTGAAACTTTTGTTTATACTGCAAATAGAATTGAAGGAGATGGACCAAATAGCATATTTAGAGTTGCAAAATTTGAGGATGATCAGAAGGCATACACGGTCTCATTAAACCATTCTGAGTTGAAAGCTAATTGTAGTTGCCAAATGTTTGAATATTCAGGCATCCTTTGCAGACATATTTTAACAGTTTTCACTGTGACAAATGTACTTACATTACCACCCCATTACATCTTGAAACGTTGGACAAGAAATGCAAAAAGCAGTGCCGGATTGGATGAACATACCGGTGAATCACATGCGCAGGAGTCTTTGACAGCAAGATATAGCAATCTATGTAAGGAAGCCATCAGATACGCTGAGGAAGGGGCAGTAACTGTGGAAACATATAATGCTGCAATAAGTGGTATTAGAGAAGGTGGAAAGAAGGTTGCTAATGTGAAAAGAAGTGTTGCCAAAGTCTCTCCTCCTAACAATGTGGCCAGTGGGACTGCATATGATGACAGGAAAACTACCACTCCAACTTCAGATACAACTCCTCTTTTATGGCCACGGCAAGATGAGATAACGAGGAGGTTTAATCTTAATGATGCTGGTGGTCCTGTTCAATCAGTTGCTGATCTAAACTTGCCACGGATGGCCCCAGTCTCTCTTCATCGTGATGATGGTCCATCTGAAAACATGGTAGTTCTTCCATGCCTAAAATCAATGACATGGGTAATGGAGAACAAGAACTCAACTCCAGGGAATAAAGTAGCTGTTATCAATCTTAAGTTGCAAGATTATAGCAGGGTTCCATCCACAGAATCTGAGGTTAAGTTTCATCTTTCTAGAGTTACTTTGGAACCAATGTTGAAGTCTATGGCTTACATCAGTGAACAGCTCTCAACACCAGCTAATAAGGTTGCAGTAATAAATCTCAAGCTTCAAGATACTGAGACAACCTCTGGTGAGTCAGAAGTGAAGTTTCAGGTGTCCCGGGATACATTGGGTGCTATGCTACGATCAATGGCCTATATCCGTGAGCAGCTTTCTCATGCTGACGATGCACATTTAGAACCTGTATCCAAGAAGCATAAGAAGTAA 2496 0.4002 MEFDTVDVAKAFYIEYARHMGFSSKVGPYGHSKIDGENYREFVCGREGLRKGLNESCNAMIRIELKGQNKWVVTKLVKEHTHSLFSSSKAYNNHPSKHFSSVGRTMPETYQGVGLVPSGVMYVSMDGNRVSNQNTRGMKNIHTTPAERSHPVKNSSLVNYTVRPSLPNRTLGRDAHNLLEYFKKMQAENPGFFYAIQLDEDNRMSNVFWADARSRTAYSYYGDTVHLDTTYKVNQYRVPFAPFTGVNHHGQMVLFGCALLLDDSEASYLWLLKTFLTAMNDCQPVSITTDQDRALQTAVSQVLPQTRHCISKWHILREGQEKLAHVCLAHPNFQVELYNCINLTETIDEFESFWNCIIDKYELRRNDWLQSLYNARAHWVPAFFRSSFFAALSPTQGFDGSFFDGYVNQQTTLPLFFRQYERALESWIEKEIEADFETVCTTPVLKTPSPMEKQVANLYTRKIFSKFQDELVETFVYTANRIEGDGPNSIFRVAKFEDDQKAYTVSLNHSELKANCSCQMFEYSGILCRHILTVFTVTNVLTLPPHYILKRWTRNAKSSAGLDEHTGESHAQESLTARYSNLCKEAIRYAEEGAVTVETYNAAISGIREGGKKVANVKRSVAKVSPPNNVASGTAYDDRKTTTPTSDTTPLLWPRQDEITRRFNLNDAGGPVQSVADLNLPRMAPVSLHRDDGPSENMVVLPCLKSMTWVMENKNSTPGNKVAVINLKLQDYSRVPSTESEVKFHLSRVTLEPMLKSMAYISEQLSTPANKVAVINLKLQDTETTSGESEVKFQVSRDTLGAMLRSMAYIREQLSHADDAHLEPVSKKHKK 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00302 831 Pfam SWIM zinc finger 503 537 IPR007527 GO:0008270
Viun6g00302 831 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 616 IPR031052 GO:0006355
Viun6g00302 831 ProSiteProfiles Zinc finger SWIM-type profile. 503 539 IPR007527 GO:0008270
Viun6g00302 831 MobiDBLite consensus disorder prediction 625 651 - -
Viun6g00302 831 SMART 26again6 514 541 IPR006564 GO:0008270
Viun6g00302 831 Pfam MULE transposase domain 225 317 IPR018289 -
Viun6g00302 831 Pfam FAR1 DNA-binding domain 12 85 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00302 Viun-Chr6 7755836 7766726 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun6g00302 MULE 7e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00302 - - gmx:100786516 1513.05