Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00230 ATGAGTTTCCAAAAAGGCTCTCGACCTTCTTCTCCCTATTCTCCCTCGTCCCCTTCCTCTCCTCCTTCCTACATTCCACCCCACCGTACCCAGCTGCACCCTCGCATGATCTCCCTCTACACTTCTTCTCCTTCTTCTTCTTCCACTCACACAAATCCAAATCCCAACAAACCCCACACCGGAAAATGCCTTCTCTTCCTCTTCGCCTTCCTCTTCTTCACCGCTCCCTTCCTCTTCTACCTCTTCTCCACCGCCCTCCAAATCCACTCCTCCCCCAAATTCGCCGATTCTCGCCCCGTCTCTTTCGCCCTCGCTTTCCGGGCCGGCCCCGACGCTCTCCGCCTCTCCGTCTACCACTTTCTTGGCCCCGGCCTCAGCCTCCTCGCCGCCGCTCACTCCGCCGCCGCTGTTCCCGGCTTCGATGCCCCGCCCGACGCCCTCCGTGGCGCCGTCGCCGAGCTTGTCCGGTTCGCCAAGGGCAAGGTGCCTCACCGGGAGTGGGGGAACACCGTCGTGCGCCTCGCGGCGTCCGAGGAGCTCGAGCAGCTCGGCTCCGAGGAAGCAGAGAAGGTTCTGGAATGTTGCAGACGGGCCTTGAAGGCGTCCGGGTTCCTGTTCAAGGATGAATGGGCACGCGTCGTTTCAGGGGAGGAACAAGGCATCTCTTCTTGGGTTGCAGTAAATTATGCTCTTGGAAACTTGGGACGCGAGCCTCAGGAAACAACTGGAATAGTTGAACTTGGTGGGGCTTCTTTGCAGGTTGCATCAACTAAACTTAATGCAGATTTAGCTCACTCTTTGCGAACTATAAGATTGTCTGGGGTTACATACAACCTTTACACTTGGAGTTTGCCACAACTGGGTCAGGATGTGGCATGGAAATCATTAGAGGAGAGACTGAAATATAGAGAGTTGAAGCTTTCTTCAAAATCTAGCAAAAGAAATATCACCAATGCTTGCATTCCTAGAGGGTATGAGTACCCTCAAATCTCTGATGCAAGTTATGTAAAACACCCAATCTTTCAACCAGCTGGAAATTTCACTACATGCAAATCAGAAGCTTTCTCATTGTTAAAAAGAACAGAAGATAGATGCCTTCACCCAGCATGTAAAATCACTTCATCCTTCTCTGAGTTATTAGGCGAACAAGATTCAAAAAGCTTCTTGTATACTTCAGAGATTCTTAGGATGGCTCCTAGGACTTCTTTGTTTCAATTAGAGGAAGCAGGCCGACATTACTGTGAAGATCATTGGGATGCTCTCAAAGATCAACATAATCAAATTGATTATCTTGATTTATTGCAGTATTGTTTCTCTTCTGCATATATGCTGGCTCTATTGCATGATGTTCTTGGAATTGCTATGGAAGAGAAAAGGGTTGGATTTGGGAACGAGAAGATTAACAGTCATGTAGATTGGACACTTGGATCCTTCATAATTGAAACAATGGGAGAACCTCTTGAATTGGAACATATAGATACAGGGATGATAGTAGGGAATGAATCAGTAACATATTTTTCATTATTTGCATTTCTTTTCTTAATCATACTTGCTGCATTCTTTGTTATGCAATGGAGAAAGCCACAATTGAAGACGGTATATGACCTTGAGAAGGGACACTATATTGTTACAAGAATACGTAGGTGA 1647 0.4754 MSFQKGSRPSSPYSPSSPSSPPSYIPPHRTQLHPRMISLYTSSPSSSSTHTNPNPNKPHTGKCLLFLFAFLFFTAPFLFYLFSTALQIHSSPKFADSRPVSFALAFRAGPDALRLSVYHFLGPGLSLLAAAHSAAAVPGFDAPPDALRGAVAELVRFAKGKVPHREWGNTVVRLAASEELEQLGSEEAEKVLECCRRALKASGFLFKDEWARVVSGEEQGISSWVAVNYALGNLGREPQETTGIVELGGASLQVASTKLNADLAHSLRTIRLSGVTYNLYTWSLPQLGQDVAWKSLEERLKYRELKLSSKSSKRNITNACIPRGYEYPQISDASYVKHPIFQPAGNFTTCKSEAFSLLKRTEDRCLHPACKITSSFSELLGEQDSKSFLYTSEILRMAPRTSLFQLEEAGRHYCEDHWDALKDQHNQIDYLDLLQYCFSSAYMLALLHDVLGIAMEEKRVGFGNEKINSHVDWTLGSFIIETMGEPLELEHIDTGMIVGNESVTYFSLFAFLFLIILAAFFVMQWRKPQLKTVYDLEKGHYIVTRIRR 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00230 548 Gene3D Exopolyphosphatase. Domain 2 215 469 - -
Viun6g00230 548 Pfam GDA1/CD39 (nucleoside phosphatase) family 137 484 IPR000407 GO:0016787
Viun6g00230 548 Gene3D - 140 476 - -
Viun6g00230 548 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 63 484 IPR000407 GO:0016787
Viun6g00230 548 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00230 Viun-Chr6 5380119 5412471 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00230 53 482 Nodulin-like Gene Family AT4G19180 23.750 2.38e-22 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00230 K01510 - gmx:100806446 817.764