Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00164 ATGAATACGAAAAGGCAGAACGAAGAGCCGGAGCTGGAGCCTTCTGCCGGAGAGGATGACGGCATCATTCTCAGTCAGCAACTGTTTTGCACACCGGATTACTTAACTCCGGAAGATCAGTTTCCTTTGAAAGGCTTCCATAGTGACATCGACAAGGTGGAGGAAGATGACCCATGCCCCAAGTCACCCCGGAAGGAGAAACCGTATGAAACCAAATTCAAAAGACGCAGAGTGGAGGACGGTGATACTCTCAGTTTTACCGATGATGGTGAACCAGTTGTGAAACTTGGCAGTAACCATGAGCCATTTGTGGGATTTGAGAGTCATTTTGATCGAGTAGAAGACTTTCATATATTAAGGACTCATACGTCGCGTTCTGCTGGATGCCGGCCTCCTCTTTGCAATAGAAACTCCTTTTTGAACAGCAATTCAGAGGACGAAGAGAACATTTTTAGAATCCAAACATTAAAATGGAATGACTATGGAAATGGTCCACCTTCCATTATTGGTAGTAATGGTTCGTCACGCTATATCAATGACTTTCGTGAGATTAAGGAAATTGGTAAAGGAAACTTTAACAAAGTTTTTAAAGTAATGAACCGATTAGATGGCTGCATGTATGCTGTGAAACGTACCATCGAAAGGTTGCGTACGGAACCAGAAAGGCTTAAAGCTTTTAACGAAGTTCAATCTTTGGCTGCCATAGGGCGCCATAAAAATATAGTGACATACTATTATTCTTGGATTGAGGTTGAACAAATGTATACTCAGATGGAGTTTTGTGATCACAACTTATCTTATGAAAACTGTCCAATATTGCTTACCGAACGACATGAACTGCAAGTTTTATATCAGGTTTCTAGTGCATTGCAATTTATACATGAAAAGGGAATAGCTCATCTTCATGTCAAGCCACAAAATATTTACGTCAAAGATGGCATTTATAAGCTTGGTGGTTTTCGATGTGCGACTCTATTAGACAATAGCTTGCATGTTGAAGCGGGTGATGCACAGTACATGCCGCCGGAGATTCTCAATGAGAATTATGATCACCTAGGGAAGGCAGATATCTTCTCCCTAGGAGCTTCCATGTTTGACATAATTCAAAGATCACGTTTGCCAAAAGCAGAAACTGAGTTCTCTAAACTTAAAGAGGGAAAGGTGCCACACTTGCCTGGAGTTACAATCCAGTTTCAAAACTTGCTCAAGGTCATGATGGACCCTGATCCTCTTAAGCGTCCTTCTGCCACTGAGATATTGGGAAATTCAATATTCAGAGGATCCCTTAAAATGACATAA 1299 0.4142 MNTKRQNEEPELEPSAGEDDGIILSQQLFCTPDYLTPEDQFPLKGFHSDIDKVEEDDPCPKSPRKEKPYETKFKRRRVEDGDTLSFTDDGEPVVKLGSNHEPFVGFESHFDRVEDFHILRTHTSRSAGCRPPLCNRNSFLNSNSEDEENIFRIQTLKWNDYGNGPPSIIGSNGSSRYINDFREIKEIGKGNFNKVFKVMNRLDGCMYAVKRTIERLRTEPERLKAFNEVQSLAAIGRHKNIVTYYYSWIEVEQMYTQMEFCDHNLSYENCPILLTERHELQVLYQVSSALQFIHEKGIAHLHVKPQNIYVKDGIYKLGGFRCATLLDNSLHVEAGDAQYMPPEILNENYDHLGKADIFSLGASMFDIIQRSRLPKAETEFSKLKEGKVPHLPGVTIQFQNLLKVMMDPDPLKRPSATEILGNSIFRGSLKMT 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00164 432 ProSiteProfiles Protein kinase domain profile. 181 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g00164 432 Pfam Protein kinase domain 181 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g00164 432 MobiDBLite consensus disorder prediction 1 23 - -
Viun6g00164 432 MobiDBLite consensus disorder prediction 40 68 - -
Viun6g00164 432 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 135 423 - -
Viun6g00164 432 MobiDBLite consensus disorder prediction 44 68 - -
Viun6g00164 432 SUPERFAMILY Protein kinase-like (PK-like) 175 427 IPR011009 -
Viun6g00164 432 Gene3D Transferase(Phosphotransferase) domain 1 262 428 - -
Viun6g00164 432 Gene3D Phosphorylase Kinase; domain 1 170 261 - -
Viun6g00164 432 FunFam Wee1-like protein kinase 260 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00164 Viun-Chr6 4001435 4004483 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00164 13 425 Core Cell Cycle Gene Families AT1G02970 45.131 1.25e-113 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Viun6g00164 Pkinase 2.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00164 K06632 - gmx:100784055 457.988