Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00157 ATGAATACGAAAAGGCAGAACGAAAAGCGGGAGCTGGTGCCCTCAGCCGGAGACGATGACGACATCATTCTCAGTCAAGAACTCTTAAGCACACCGGATTACTTAACTCCTGAAAATCAGTTTCCTTTGAAAGGCTTCAACAGTGACATGGACAAGGTGGAGGAAGATCTTGTTTGTCCCGGAGCACCGAAAAAACCGTGTAATATGAAAATTAAGATATCCCGGATGGATGATGGTGATGCTCTCAGCTCCGATGATGTTGAACCAGTTGTGGAAGTTGACAGTGACCGTGAGCCACTTGTGGATTTTGGTAGTGACTTTGTTCGAAAAAAATACTCTCATAAGCAAAGGACTGGTAGATATAGGTCGCTATCTGCAATGGCACTAATGCGTAGGGTTACGCCTCCTGCTTGTGTTACAAACCCTTATTTGAAAAATATTTCGGCAGGGAAAAGGGAGCCTTTTATATACCAAAGATCAACTTCCCCTGGCCTCTGCCCTTCCCTCGTTGGTGGTCGTCGTGGTCTTTCACGCTACCACAATGACTTTAATGAGATTGAGAAAATCGGTAGCGGAAATTTTGGCAATGTTTTTAAAGTATTGAGACGAGTAGATGGCTGCCTGTATGCTGTAAAACAAACCAGCGACCAGTTGTGCAAAAATTCCGAATGGAAAGCTTATGATGAAGTGCAATCTTTGGCTGCAATAGGTTTTCAAGAGAATATTAGAGGATATTATTCTTCGTGGATCGAGAATAAAATTCACTATATTCAGATGGAACTATGTGATCATAGCTTATCCATGAAAAGTTTCCCAGCATCACTCTCTCAACGATATGAAATAGAAGTTTTATATCAGATTTCTAGTGCATTGCAATTTATACATGGGAAGGGAATAGCTCATCTTGATGTCAAGCCAGAAAACATTTATGTTAAAAGTGGTGTTTATAAGCTTGGTGGTTTTGGATATGCAACTCTATTAGACGATAACGTGCTTGTTGAAGCGGGTGATGCACAGTACATGCCGCTGGAGATTCTCAATGAGAATTATGATCACCTAGATAAGGCAGATATCTTCTCCCTAGGAGCTTCCATGTTTGACATAATTCGAAGGTCACGTTTGCCAAGAGCAGAAACTGAGTTCTCTAAACTTAAAGAGGGAAAGGTGCCACACTTGCCTGGAGTTACAGTCCAATTTCAAAACTTGCTCAAGGTCATGATGGACCCTGATCCTCTTAAGCGTCCTTCTGCCACTGAGATATTGGGAAATTCAATATTCGGAGGGTCCCTTAAGATGACGTAA 1302 0.4194 MNTKRQNEKRELVPSAGDDDDIILSQELLSTPDYLTPENQFPLKGFNSDMDKVEEDLVCPGAPKKPCNMKIKISRMDDGDALSSDDVEPVVEVDSDREPLVDFGSDFVRKKYSHKQRTGRYRSLSAMALMRRVTPPACVTNPYLKNISAGKREPFIYQRSTSPGLCPSLVGGRRGLSRYHNDFNEIEKIGSGNFGNVFKVLRRVDGCLYAVKQTSDQLCKNSEWKAYDEVQSLAAIGFQENIRGYYSSWIENKIHYIQMELCDHSLSMKSFPASLSQRYEIEVLYQISSALQFIHGKGIAHLDVKPENIYVKSGVYKLGGFGYATLLDDNVLVEAGDAQYMPLEILNENYDHLDKADIFSLGASMFDIIRRSRLPRAETEFSKLKEGKVPHLPGVTVQFQNLLKVMMDPDPLKRPSATEILGNSIFGGSLKMT 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00157 433 FunFam Wee1-like protein kinase 261 429 - -
Viun6g00157 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 299 311 IPR008271 GO:0004672|GO:0006468
Viun6g00157 433 SUPERFAMILY Protein kinase-like (PK-like) 178 426 IPR011009 -
Viun6g00157 433 Pfam Protein kinase domain 183 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g00157 433 ProSitePatterns Protein kinases ATP-binding region signature. 189 212 IPR017441 GO:0005524
Viun6g00157 433 Gene3D Phosphorylase Kinase; domain 1 173 261 - -
Viun6g00157 433 SMART serkin_6 183 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g00157 433 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 108 423 - -
Viun6g00157 433 Gene3D Transferase(Phosphotransferase) domain 1 262 427 - -
Viun6g00157 433 ProSiteProfiles Protein kinase domain profile. 183 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00157 Viun-Chr6 3619734 3622358 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00157 19 426 Core Cell Cycle Gene Families AT1G02970 48.325 1.02e-121 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Viun6g00157 Pkinase 1.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00157 K06632 - gmx:100784055 480.715