Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00155 ATGGGTTATATATGTGATTTTTGTGGAGAGCAGAGATCCATGGTGTACTGCCGTTCTGATGCTGCGTGCTTATGTTTGTCTTGTGATCGGAGTGTGCATTCTGCTAATGCCCTTTCCAGGCGTCATTCACGAACCCTTTTGTGCGAGAGATGCAATTCACAAGCTGCCTTTGTGAGGTGTGTTGAGGAGAAAATTTCAGTGTGTCAGAATTGTGATTGGTTGGGTGACGGAGTGTCTACATCTTGGACACATAAGAGACAGGGAATCAGTTGCTACTCCGGCTGCCCTTCAGCCGCGGAACTGTCTTCAATATGGTCATTTGTGTTGGATATCCCTTCCATCAGGGAGTGTACTACATGCGAGCAAGAACTAGGCTTAATGAGTATTAATGAGAACAGCGAGAGTGTTGGAGTTGCTACCAATGAAAAATGCCCTGCATTATGTTGTGAAGATTTTGACATGGATGAAGTGGATCTAAATATTGAGAAGTATGAAGAACTTTTTGGTTCCGAAGAGCTATTTGAAAACGGCGGAATTGATAGTTTGTTTGGGACAAAGGACATGTCTGCCGAGGTGAATGCTTGCAGCAACGCAGCATCTGCAGATTCGATTTTGAGTACTAAAACGGAACCGATTGTTTGTTTTTCTGGGATTACCGGAGACTATCAAGACTGCGGGGCTTCTTCTTCCATGGTTTTGATGGGAGAACATCCTTGTCCTGACAATTCCCTACACTCTGCCAACCGCACCAATGCTGTCTTGCGTTACAAGGAAAAGAAGAAGGCGCGAAAGTTCGATAAACAAGTTCGGTATGCCTCTCGCAAGGCCAGGGCCGACGTCAGAAGGCGTGTCAAGGGCCGCTTTGTGAAAGCCGACTATGACCCTTTGACCACAACCAGAAGCTGCTGA 909 0.462 MGYICDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSRRHSRTLLCERCNSQAAFVRCVEEKISVCQNCDWLGDGVSTSWTHKRQGISCYSGCPSAAELSSIWSFVLDIPSIRECTTCEQELGLMSINENSESVGVATNEKCPALCCEDFDMDEVDLNIEKYEELFGSEELFENGGIDSLFGTKDMSAEVNACSNAASADSILSTKTEPIVCFSGITGDYQDCGASSSMVLMGEHPCPDNSLHSANRTNAVLRYKEKKKARKFDKQVRYASRKARADVRRRVKGRFVKADYDPLTTTRSC 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00155 302 ProSiteProfiles CCT domain profile. 249 291 IPR010402 GO:0005515
Viun6g00155 302 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Viun6g00155 302 Pfam CCT motif 249 291 IPR010402 GO:0005515
Viun6g00155 302 CDD Bbox1_BBX-like 4 47 - -
Viun6g00155 302 SMART bboxneu5 4 47 IPR000315 GO:0008270
Viun6g00155 302 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00155 Viun-Chr6 3573632 3575630 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00155 1 301 C2C2-CO-like Transcription Factor Family AT3G07650 55.882 3.59e-127 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Viun6g00155 CCT 6.7e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00155 - - vun:114189260 615.535