Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun6g00153 | ATGTTTTGTCAGGATAAAATTTCGTTTAACCATCTGGTGAAGTTATATGATCCTTTGGGCAAAAAATTTGAAATTTTTGTGGATACAGATGAGGGTGGAAGGATGGTGTTATTTGGATTTTGTCAGTATGTTGCATACTACGAGTTCGTTTCTCCTTGTTTCCTACATTTAAATTATGTAGGAAACAATGTCTTTGTTCACAGGATCTTCTCGGTGGAAGGAGTTGAAATTGATTATAGTAGAGATTTGCAGGCTGGTGGTAGCAACCAACTTGAAGTTGGTTCTGTTGATTGTGAGAAAATATTAAGTTCTTATGATGTTCATTCATCTTCTTTGTATCTGGATTCAAAATTTGTGAAAGAAGGCTTGGTGAAAGGGAGAAAAAACTATGTTCTGACGAATGGCCATGCACAATTCTGGAACTGCAAGATTCGATGGACAGGCAGGAGTTCATTTGAATGTTATCTGACTTGTGGTTGGAAGAAATACTGTCAAGAGAATGGGTTGGTTGCGGGAGATCGTGTTAGATTTATGGTGCAGACTGACCAAAGCAACGTCATCCAAATTCTGAAGATTTAG | 579 | 0.3765 | MFCQDKISFNHLVKLYDPLGKKFEIFVDTDEGGRMVLFGFCQYVAYYEFVSPCFLHLNYVGNNVFVHRIFSVEGVEIDYSRDLQAGGSNQLEVGSVDCEKILSSYDVHSSSLYLDSKFVKEGLVKGRKNYVLTNGHAQFWNCKIRWTGRSSFECYLTCGWKKYCQENGLVAGDRVRFMVQTDQSNVIQILKI | 192 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun6g00153 | 192 | Gene3D | - | 89 | 191 | IPR015300 | - | |
Viun6g00153 | 192 | CDD | B3_DNA | 100 | 177 | IPR003340 | GO:0003677 | |
Viun6g00153 | 192 | Pfam | B3 DNA binding domain | 99 | 189 | IPR003340 | GO:0003677 | |
Viun6g00153 | 192 | ProSiteProfiles | B3 DNA-binding domain profile. | 97 | 192 | IPR003340 | GO:0003677 | |
Viun6g00153 | 192 | SUPERFAMILY | DNA-binding pseudobarrel domain | 99 | 187 | IPR015300 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun6g00153 | Viun-Chr6 | 3397695 | 3398443 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun6g00153 | 102 | 190 | REM Transcription Factor Family | AT4G31650 | 31.868 | 4.81e-09 | 53.1 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | B3 | Viun6g00153 | B3 | 1.1e-12 | CL0405 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun6g00153 | - | K08206 | vun:114186973 | 404.445 |