Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00134 ATGCGAAAACTAGATAAAAGAGACTTTAAGACCAATAATCCTCGACCTGAGACAAGAACAGGATGTGCTGCAAGAGTGAAAGTTAAAAGAGTTGGTGAAAGATATAGAGTAGTTGATTTTATTGATGATCATAACCACCCACTTCATCCACCAGAAACAGTTCATCTATTACCTTGTAAACAAAAAATAACAGATTTTCAAGCATATGATCTTGAAATGGCAGAACAGGCAGGGATTCAACAAAAGGCATCATTTGATTTGATGAGTAAATATGTAGGAGGTAGAGAGAATTTGGGCTATACAAGAGAAGATGCAAAGAACTATCTGAACTCAAAGAGGCGAAGAGATATGGCATATGGTGAAGCTGGAATTTTGTTACAATATTTCCAACAACAATTAATAGATAATCCTTCATTTTTCCATGCCTACCAAATGGATTTGGAAGAACAAATAACAAACATATTTTGGGCTGATGCAAGAATGTTATTTGATTATCATTGTTTTGGAGATGTCATTTCGTTGGATACAACATATTGTACAAATGGAGATCATAGGCCTCTTGCAATTTTCTCGGGATTTAATCATTATAGATGA 594 0.3451 MRKLDKRDFKTNNPRPETRTGCAARVKVKRVGERYRVVDFIDDHNHPLHPPETVHLLPCKQKITDFQAYDLEMAEQAGIQQKASFDLMSKYVGGRENLGYTREDAKNYLNSKRRRDMAYGEAGILLQYFQQQLIDNPSFFHAYQMDLEEQITNIFWADARMLFDYHCFGDVISLDTTYCTNGDHRPLAIFSGFNHYR 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00134 197 Pfam FAR1 DNA-binding domain 3 49 IPR004330 -
Viun6g00134 197 PANTHER OS01G0519700 PROTEIN 7 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00134 Viun-Chr6 3030552 3031145 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun6g00134 FAR1 3.2e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00134 - - vun:114188295 416.001