Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00133 ATGTCTCATTATACCTGGCATAATGTGACTGAGAGTTCAAGAATCACTACCAAGCATTCTTTTTCAACCTTGTCATTTGTTGCCGAGATCTTTATCTTCCTTTATGTTGGTATGGATGCCTTGGACATTGAAAAATGGAAATTCGTCAATGATAGTCCTGGAACATCTATTGCAGCTAGTTCAGTATTGTTGGGCCTAATTCTTGTTGGAAGAGCAGCTTTTGTTTTCCCCTTATCCTTTTTATCCAACTTGGCTAAAAAATCACCAAATGAGAAAATTAGCTTCAGACAGCAAGTGATTATTTGGTGGGCAGGTCTTATGAGGGGGTTGTTTCAATGGCACTTGAACATAATCAGGTAG 360 0.3861 MSHYTWHNVTESSRITTKHSFSTLSFVAEIFIFLYVGMDALDIEKWKFVNDSPGTSIAASSVLLGLILVGRAAFVFPLSFLSNLAKKSPNEKISFRQQVIIWWAGLMRGLFQWHLNIIR 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00133 119 Pfam Sodium/hydrogen exchanger family 8 112 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Viun6g00133 119 PANTHER SODIUM/HYDROGEN EXCHANGER 1 110 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00133 Viun-Chr6 3008875 3009675 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00133 1 109 Antiporters AT3G05030 82.569 6.77e-63 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00133 - - gmx:732573 214.157