Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00110 ATGGATCACTCCTCTATCTTTTTATTGTCTCACCTTCATCTTCAAACCTTGTTGTCATCTTTGATCATTCTTGTAATAATTTTCTGCATAACCTTTCTCAAAGGCCTTGAATCTCACTTGTTGAAGAAACCCAAGAACCAAGAAGTACCCTTACCACCTGGTCCTAAACCATGGCCTATCATCGGTAACCTTCCTGAAATGCTTGCAAATAGGCCTACATTCAGGTGGATAAACAACCTAATGAAGGAAATGAAAACTGAGATTGCTTGCATTCGCCTGGGCAATGTTCATGTTATACTCGTAACTTGTCCGATCATTGCTCGTGAATTCTTGAGGAAACAAGATGCTACTTTTGCTTCTAGACCCACAAGCATCACCACTTCTCTTATAAGTCGTGGATATCTCACCACAACCCTTGTGCCCCTAGGGGAACAATGGAAGAAAATGAGAAGAATTGTTGGCAATGAGCTGTTGTCCACAACCATTCACCACCAACTTCAACACAAGAGGCTTGAAGAAGCCAACAACCTCGTGTTTTACATCTACAGTATGTGCAAAAACAATGTCAACGCTGATGTTGGTCTTGTGAATGTGAGGGATGTCACGCAACACTATTGCTGCAACGTGATCAAGAATTTGAGCTTTGGTATGAGGTATTTTGGGGAGGGTAAGAATGATGGAGGACCTGGTTGTGAGGAAGTGGAACACCTTGAAGCCATTTTTGTATTGCTAAAGTACATTTATGACTTTAGTGTTTCTGATTATGTTCCTTGCCTGAGAGGACTTGACTTGGACGGCCATGACAACAAGGTGAAGAAGGCAATACAAATTGTGAACAAGTATCACGATCCCATCATTGACCAACGTATCAAAGAATGGAATGATGGGTCCAAGATTCATACAGAAGATTTTCTTGATATTCTCATCTCACTCAGAGATGCCAACAATAACCCAGTATTGACTACGCAAGAAATCAAGGCACAAATCAACGAATTGATGATGGCTGCGGTGGATAACCCATCAAATGCAGTGGAGTGGGGTTTGGCAGAGATGATAAACCAGCCTGAGTTGCTTCAACATGCCACAGATGAATTGGACAGGGTAGTTGGAAAGGAGAGATTGGTCCAAGAATCAGACATTCCAAAACTAAACTACATTAAAGCATGTGCAAGAGAAGCTTTTCGCCTTCATCCCGTTGCACCTTTCAATGTTCCTCATGTTTCCGTGAAAGACACCGTAGTGGGAAAGTACGTAATTCCGAATGGGAGCCATGTGCTGTTAAGTAGACAGGAACTTGGACGAAACTCAAAAGTTTGGGGTGACGAAGCTCTCAAGTTTAAGCCAGAACGTCATCTTAAGGGCAATGTGGTCTTGACAGAGTCAGATTTGAATTTCGTATCTTTCAGCACAGGAAGACGTGGTTGTCCAGGAATCGTGCTCGGAACAACAATGACAGTGATGCTGTTTGCTAGGTTGCTTCATTCCTTCACTTGGACTGCACCGCCCAATGCCTCACCCATCAACCTTGCAGAGAGCCACCATGATTTACTCCTGGCTAACCCACTTCTGGCAGTGGCAAAGCCAAGATTAACACCACAACTTTATACTGTGTGA 1614 0.4312 MDHSSIFLLSHLHLQTLLSSLIILVIIFCITFLKGLESHLLKKPKNQEVPLPPGPKPWPIIGNLPEMLANRPTFRWINNLMKEMKTEIACIRLGNVHVILVTCPIIAREFLRKQDATFASRPTSITTSLISRGYLTTTLVPLGEQWKKMRRIVGNELLSTTIHHQLQHKRLEEANNLVFYIYSMCKNNVNADVGLVNVRDVTQHYCCNVIKNLSFGMRYFGEGKNDGGPGCEEVEHLEAIFVLLKYIYDFSVSDYVPCLRGLDLDGHDNKVKKAIQIVNKYHDPIIDQRIKEWNDGSKIHTEDFLDILISLRDANNNPVLTTQEIKAQINELMMAAVDNPSNAVEWGLAEMINQPELLQHATDELDRVVGKERLVQESDIPKLNYIKACAREAFRLHPVAPFNVPHVSVKDTVVGKYVIPNGSHVLLSRQELGRNSKVWGDEALKFKPERHLKGNVVLTESDLNFVSFSTGRRGCPGIVLGTTMTVMLFARLLHSFTWTAPPNASPINLAESHHDLLLANPLLAVAKPRLTPQLYTV 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00110 537 Gene3D Cytochrome P450 38 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00110 537 Pfam Cytochrome P450 52 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00110 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Viun6g00110 537 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 20 536 - -
Viun6g00110 537 FunFam Cytochrome P450 9 44 533 - -
Viun6g00110 537 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00110 537 PRINTS E-class P450 group I signature 82 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00110 537 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00110 537 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00110 537 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00110 537 PRINTS E-class P450 group I signature 106 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00110 537 PRINTS E-class P450 group I signature 387 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00110 537 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun6g00110 537 SUPERFAMILY Cytochrome P450 52 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00110 Viun-Chr6 2044565 2046274 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00110 17 535 Cytochrome P450 AT4G39950 54.598 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00110 - K14984 vra:106779949 954.896