LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun6g00074	ATGGAAGAAACACAAGCTCTGGGTCTGGATAGCATTACTCTACTAAAAGATGATATCCCTGAAAACAGCTGTAACATCATTGGCTCTGTTTCAACCAACAACGACTGTGGTGAATCCCACTTGGGTTTCTTTCCTAAAGTGGGGATGACTTTTGAAACTGTGGATGAACTACAGAAATTTTATAAACAACATGCAATCAGAAGTGGTTTCGGTGTCCGAATCAAAACATCAAAGAAAGACGATCATAATGAGTTGTGCTACGTCAAACTAGTTTGTTCTCGAGAAGGAAACCATGTGTCCAACATCCCCCCGAAAAAAAAAACCATCCCGACACAAAGAAAGGCTTGCCCTGCACGTGTTACTACTGTTAAAGAGGAAGGTGAATGGTTGATGAGAAGTGCGGTGGAGGAACATAATCACCATTTAAGTCCACACAAATCAAAGCTTGTGTGCGGTAATAGGAAGATAAATATGCAGGCAAAAAGAGTAATCGATATCAATGATCAAGCGGAAGTGCGTTTGAACAAAAGTTTTCGGTCTTTGGTATTTGATGCTGGAGGTTATGAAAACTTGGATTTTATGGAAAGGGATGTCAGGAACTATATTGGTCAGCAGAGACGAGCGCTGGTTAAGGATGGCGATGGGCAAACATTGTTTAATCATTTCTCGAGGATGAAGGGAATTAAATAA	690	0.4058	MEETQALGLDSITLLKDDIPENSCNIIGSVSTNNDCGESHLGFFPKVGMTFETVDELQKFYKQHAIRSGFGVRIKTSKKDDHNELCYVKLVCSREGNHVSNIPPKKKTIPTQRKACPARVTTVKEEGEWLMRSAVEEHNHHLSPHKSKLVCGNRKINMQAKRVIDINDQAEVRLNKSFRSLVFDAGGYENLDFMERDVRNYIGQQRRALVKDGDGQTLFNHFSRMKGIK	229

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun6g00074	229	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	41	203	-	-
	Viun6g00074	229	Pfam	FAR1 DNA-binding domain	59	143	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun6g00074	Viun-Chr6	1345576	1346265	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Viun6g00074		FAR1	4.7e-14	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun6g00074	-		-	vun:114187809	470.7