Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00049 ATGGCAATGGTTGAGCCTCATGATGTTACAAGTGTAAGGAACAAGCTGAAGACGCTTTGTGCTGTGAATGGCTGCTCCTACGTCATTTTGTGGCGCATTCATCCTCAAAATACCCTGATGCTACGCATGGAAGATGTATATTGTGAAGATCAATTGGGAGAAGAGATTGTAAACACAGTTCCACAATTCCATTCGCTGGGTGAAGGAATTGTTGGTCATGCTGCTTTGACCGGCAAGCACAGATGGGTGGAGTCAGATGGTCAAATGTGTGAGGATGATTTTGGTTTGCATCCACAGTTCTTGTCCGGGATAAAGACAGTTGTGATGATATCTGTTAAAGCCTGGGGAGTGGTACAATTTGGATCCAGAAAGAAGATTTTGGACAGAGTGAAATTTGTGGAACAAACAGAAAGGTTGTTGAGGGGAATAGAAGATGAGGGTTTGGATCTATATCTAGATTGTGAAAATTTATATGATTGGAATCTCAAATGTGTTGATAGTGAGAACTCTGAAATGGTATTGGGAAATTCGTGTTCCTATCCAAGTCTTGAAGATTCCTTCCCTTCCATGGATATGATTCTTGTGGAAGAAGGAACGACGCCGATGCATGGATTCTCTTATCTTTGTGACCAAGCAGTAGAAGCTGAAGCCGTATTTGAACACCACATAGGATGTCCAACGGATATCCCGCATTCTGATCTAGGCCATTTGTTAGCCCATTCAGACCACAGCATTTATGGAACAGTGACTTCGTGGGATGAGTCACTAGGATTTAATTCCCCATCTTTTGGTCTGATTGGTATTGATGATGTTCCATTCACATGTCAAACTGAGCATAACACTTCAATTACAGCCATGCATTGTTCTGAAGACAGTTTCTTGGGTAGCATGAGACAATATTTGAAAGTGATCAAAAGAAAGAAATATTGTCAAAGTCACAGAAAGGAGTAG 951 0.4143 MAMVEPHDVTSVRNKLKTLCAVNGCSYVILWRIHPQNTLMLRMEDVYCEDQLGEEIVNTVPQFHSLGEGIVGHAALTGKHRWVESDGQMCEDDFGLHPQFLSGIKTVVMISVKAWGVVQFGSRKKILDRVKFVEQTERLLRGIEDEGLDLYLDCENLYDWNLKCVDSENSEMVLGNSCSYPSLEDSFPSMDMILVEEGTTPMHGFSYLCDQAVEAEAVFEHHIGCPTDIPHSDLGHLLAHSDHSIYGTVTSWDESLGFNSPSFGLIGIDDVPFTCQTEHNTSITAMHCSEDSFLGSMRQYLKVIKRKKYCQSHRKE 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00049 316 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 12 143 IPR043561 GO:0003700|GO:0006355
Viun6g00049 316 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 60 138 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00049 Viun-Chr6 1112288 1115581 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00049 16 141 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G64625 40.476 3.61e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00049 - - vun:114189024 661.759