Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00036 ATGCCCTTTCTTAGAGGTTTTAGATTTAACCTCTTTTTGGTGTCTCTCTTTGCTACTTGGGTTCGAATCCAAACCAAGGTGGAAAGTTACCAATACAAAGTTGGAGATCTAGATTCCTGGGGGATCCCCACTTCATCAAATTCAAAAGTCTATGACAAATGGTCCAAATATCAGAACCTCAAGATCGGTGATTCCCTCTTGTTTCTGTACCCACCAAGCCAAGATTCATTGATTCAAGTGACAGAGGAATCCTACAAGAGCTGCAACCTTAAAGATCCAATCTTGTACATGAACAATGGGAACTCCTTGTTCAACATTACATCAGAAGGGGAGTTTTACTTCACCAGTGCAGAGTCTGGTCATTGCCAAAAGCATCAAAAGCTTCACATAACTGTGGGAGTTGGAGGAAACACCGACACACTTTCTCCATCTTCACTGCCTCAATCCGCACCTTCTTACCCAACTGCTTTTGGCGACATTCCCATGTCGGCCTCTAGTACTTCTTCTTCACCTCACCCAAATTCAAGATTTTCATTCATACTTATTGGATTCTTCCTCTGCGCACTCTTCCCGACCCTATTAAGATAA 588 0.4269 MPFLRGFRFNLFLVSLFATWVRIQTKVESYQYKVGDLDSWGIPTSSNSKVYDKWSKYQNLKIGDSLLFLYPPSQDSLIQVTEESYKSCNLKDPILYMNNGNSLFNITSEGEFYFTSAESGHCQKHQKLHITVGVGGNTDTLSPSSLPQSAPSYPTAFGDIPMSASSTSSSPHPNSRFSFILIGFFLCALFPTLLR 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00036 195 SUPERFAMILY Cupredoxins 29 132 IPR008972 -
Viun6g00036 195 FunFam Early nodulin-like protein 1 29 137 - -
Viun6g00036 195 PANTHER BLUE COPPER PROTEIN 30 155 IPR039391 GO:0009055
Viun6g00036 195 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Viun6g00036 195 Pfam Plastocyanin-like domain 48 125 IPR003245 GO:0009055
Viun6g00036 195 Gene3D - 30 142 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00036 Viun-Chr6 872754 873688 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00036 26 162 Phytocyanin Superfamily AT1G64640 63.768 1.11e-56 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00036 - - var:108342497 347.436