Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00035 ATGGGAGGGAGTCATGACCAGAGCCAAAACTTCTCCACCAACCCTTCCGACTACAAGCTTCTAGAAGAAGTTGGTTATGGCGCCACCGCCACCGTCTACCGAGCCATCTATCTTCCCTTCAACCAGGTGGTTGCCGTCAAATGCATGGATCTCGATCGCTGTGACATCAATCTGGATGATTTGCGAAGGGAAGCGCAGATGATGAGCCTGGTCGATCATCCGAACGTACTGAAGGCATACTGCTCCTTCGCTGTGGAGCGGAGTTTGTGGGTTGTGATGCAGTTCATGGACGAGGGCTCCTGTTTGCATCTCATGAAGATTGCGTACACGGAGGGGTTCGAGGAGGAGGCAATCGGATCCATCCTCAAAGAAACTCTGAAGGCCCTGCAGTACCTCCACCACCACGGCCACATTCATCGGGACGTCAAAGCCGGCAACATTTTACTTGGCAGCAGCGGCGCCGTCAAGCTCGCCGACTTCGGTGTTGCCGCTTGTTTGTTCGACGCCGGCGACAGGCAGCGCTACAGAAACACTTTTGTGGGGACCCCTTGCTGGGCTGATATTTGGTCTTTTGGGATTACGGCACTTGAGTTGGCTCATGGTCATGCCCCATTTTCAAAATACCCTCCAATGAAGGTTCTTCTAATGACCATACAGAATGCCCCTCCCGGACTTGATTATGACCGTGATAAGAAGTTCTCTAAGTCTTTTAAGGAAATGGTTGCTATGTGCCTAGTGAAAGACCAAACAAAAAGGCCATCAGCAGAGAAGTTACTGAAACATTCCTTCTTCAAACATGTTAAGCCTCCCGAGCTCTCTGTAAAAAAACTGTTTGCTGACTTACCCCCTCTTTGGAATCGTGTAAAAGCACTCCAGCTCAAAGATGCAGCTCAACTTGCAATGAAGAAAATGCCTTCTGCAGAAGAAGAGGCAATATCTCAGAGTCAATACCAACGAGGAGTTAGCACGTGGAACTTTCATATTGATGATTTGAAAGCTCAAGCTTCATTGGTGAGGGATGATGATGATATTGTTGAGATGAGGGAAGAAGATCAAAACAAAAACAATTTTTTCACTAATTACAAGGCTGGTGCAATTGATTCAGAGAAATCACCACTGAATAAAATCACATCACAGGTAGGGGCTATAGACATAAAACAGACACAGCAAAATGAATGCTTCTACAAAAACAAGAAGATTCCAGAAAGCAAAATCCAGGAACCTGCACTGCCCAAAAATATTATTTGTAAGAGAAATGGGTCAACATCAGAGGCAATGACATCTAATATACAGAAAGATATAATTATGAGCAAAATTAGAGGCCAAACAGTAAAAACCCGTCAAACTCAAAGTGGACCACTGTTGCCAGTCACAGTTCTCAATCATTTCAAATCAGAAAGGGAACAAACATCAGAAAGGCTTGAGAATGGAAATCAGTTACCGGGTGAGAAAAATAATCGTGAAGTGCGACGACCTCCAAATTTTAGTGGACCGTTGATGCTTTCTGCACGAGCCTCAGCAAATAGTTTATCAGCTCCAATAAAGTCTTCGGGAGGGTTCAGGGATTCCTTGGATGACAAGTCTAGGGCTAATCTAGTACAAATTAAAGGGAGGTTTTCTGTGACATCAGAAAATTTAGATCTTGTAAAGGATATTCCTGGAAGTTCAGTTTCACTTAGATCTTCACAGGGCTCATCACTGCGGAAATCTGCCAGTGTTAGTGATGGGATGTTGGATTCCGAACAAATGCCAATTAGTCAGGCCTCCCAAGATTCTGCCACCAATAACATCTCTGCATCACTTCTTATGACTCACCTTCAAAATCTTCTCCAGCAAACATTAATGCAACAGGATCTTATAGTGAATCTGTTGAGTAGCTTGCAATCTGCTGAAGGTATTGAAGTTTCACAGAATGGAAAGTTGCCACTAATACCTTGCAGTTCACAAATAAATAGGGGTGTCGACACAGCAGCTGCAGGGAGGGAACGTTATCTGCTGCTCAAAATAATGGAGCTTCAGACTCGTATGGTCACTTTGACTGATGAATTGACTGCTGAGAAGTTAAAATACATGCAGTTGCAACAACAGCTAACGACTCTCCAAACTAAGGAACAAAATAGGGAGAAGGGAGAGTACGTTGCGTGA 2145 0.4452 MGGSHDQSQNFSTNPSDYKLLEEVGYGATATVYRAIYLPFNQVVAVKCMDLDRCDINLDDLRREAQMMSLVDHPNVLKAYCSFAVERSLWVVMQFMDEGSCLHLMKIAYTEGFEEEAIGSILKETLKALQYLHHHGHIHRDVKAGNILLGSSGAVKLADFGVAACLFDAGDRQRYRNTFVGTPCWADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPSAEKLLKHSFFKHVKPPELSVKKLFADLPPLWNRVKALQLKDAAQLAMKKMPSAEEEAISQSQYQRGVSTWNFHIDDLKAQASLVRDDDDIVEMREEDQNKNNFFTNYKAGAIDSEKSPLNKITSQVGAIDIKQTQQNECFYKNKKIPESKIQEPALPKNIICKRNGSTSEAMTSNIQKDIIMSKIRGQTVKTRQTQSGPLLPVTVLNHFKSEREQTSERLENGNQLPGEKNNREVRRPPNFSGPLMLSARASANSLSAPIKSSGGFRDSLDDKSRANLVQIKGRFSVTSENLDLVKDIPGSSVSLRSSQGSSLRKSASVSDGMLDSEQMPISQASQDSATNNISASLLMTHLQNLLQQTLMQQDLIVNLLSSLQSAEGIEVSQNGKLPLIPCSSQINRGVDTAAAGRERYLLLKIMELQTRMVTLTDELTAEKLKYMQLQQQLTTLQTKEQNREKGEYVA 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00035 714 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 99 314 - -
Viun6g00035 714 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 9 687 IPR047173 GO:0043539
Viun6g00035 714 Pfam Protein kinase domain 18 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g00035 714 MobiDBLite consensus disorder prediction 467 497 - -
Viun6g00035 714 Gene3D Transferase(Phosphotransferase) domain 1 100 292 - -
Viun6g00035 714 MobiDBLite consensus disorder prediction 554 577 - -
Viun6g00035 714 MobiDBLite consensus disorder prediction 555 577 - -
Viun6g00035 714 FunFam Serine/threonine-protein kinase BLUS1 7 95 - -
Viun6g00035 714 ProSiteProfiles Protein kinase domain profile. 18 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g00035 714 CDD STKc_OSR1_SPAK 16 264 - -
Viun6g00035 714 Gene3D Phosphorylase Kinase; domain 1 6 95 - -
Viun6g00035 714 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Viun6g00035 714 Coils Coil 676 703 - -
Viun6g00035 714 SMART serkin_6 18 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g00035 714 SUPERFAMILY Protein kinase-like (PK-like) 12 318 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00035 Viun-Chr6 848025 869448 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00035 7 705 MAP Kinase Kinase Kinase Kinase AT4G24100 59.078 0.0 811
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Viun6g00035 Pkinase 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00035 - - vun:114187757 1345.49