Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00034 ATGGGAGGGAGTCATGACCAGAGCCAAAACTTCTCCACCAACCCTTCCGACTACAAGCTTCTAGAAGAAGTTGGTTATGGCGCCACCGCCACCGTCTACCGAGCCATCTATCTTCCCTTCAACCAGGTGGTTGCCGTCAAATGCATGGATCTCGATCGCTGTGACATCAATCTGGATGATTTGCGAAGGGAAGCGCAGATGATGAGCCTGGTCGATCATCCGAACGTACTGAAGGCATACTGCTCCTTCGCTGTGGAGCGGAGTTTGTGGGTTGTGATGCAGTTCATGGACGAGGGCTCCTGTTTGCATCTCATGAAGATTGCGTACACGGAGGGGTTCGAGGAGGAGGCAATCGGATCCATCCTCAAAGAAACTCTGAAGGCCCTGCAGTACCTCCACCACCACGGCCACATTCATCGGGACGTCAAAGCCGGCAACATTTTACTTGGCAGCAGCGGCGCCGTCAAGCTCGCCGACTTCGGTGTTGCCGCTTGTTTGTTCGACGCCGGCGACAGGCAGCGCTACAGAAACACTTTTGTGGGGACCCCTTGCTGGATGGCTCCTGAGGTTCTGCAACCTTCAAGTGGCTATAATTCTAAGGCTGATATTTGGTCTTTTGGGATTACGGCACTTGAGTTGGCTCATGGTCATGCCCCATTTTCAAAATACCCTCCAATGAAGGTTCTTCTAATGACCATACAGAATGCCCCTCCCGGACTTGATTATGACCGTGATAAGAAGTTCTCTAAGTCTTTTAAGGAAATGGTTGCTATGTGCCTAGTGAAAGACCAAACAAAAAGGCCATCAGCAGAGAAGTTACTGAAACATTCCTTCTTCAAACATGTTAAGCCTCCCGAGCTCTCTGTAAAAAAACTGTTTGCTGACTTACCCCCTCTTTGGAATCGTGTAAAAGCACTCCAGCTCAAAGATGCAGCTCAACTTGCAATGAAGAAAATGCCTTCTGCAGAAGAAGAGGCAATATCTCAGAGTCAATACCAACGAGGAGTTAGCACGTGGAACTTTCATATTGATGATTTGAAAGCTCAAGCTTCATTGGTGAGGGATGATGATGATATTGTTGAGATGAGGGAAGAAGATCAAAACAAAAACAATTTTTTCACTAATTACAAGGCTGGTGCAATTGATTCAGAGAAATCACCACTGAATAAAATCACATCACAGGTAGGGGCTATAGACATAAAACAGACACAGCAAAATGAATGCTTCTACAAAAACAAGAAGATTCCAGAAAGCAAAATCCAGGAACCTGCACTGCCCAAAAATATTATTTGTAAGAGAAATGGGTCAACATCAGAGGCAATGACATCTAATATACAGAAAGATATAATTATGAGCAAAATTAGAGGCCAAACAGTAAAAACCCGTCAAACTCAAAGTGGACCACTGTTGCCAGTCACAGTTCTCAATCATTTCAAATCAGAAAGGGAACAAACATCAGAAAGGCTTGAGAATGGAAATCAGTTACCGGGTGAGAAAAATAATCGTGAAGTGCGACGACCTCCAAATTTTAGTGGACCGTTGATGCTTTCTGCACGAGCCTCAGCAAATAGTTTATCAGCTCCAATAAAGTCTTCGGGAGGGTTCAGGGATTCCTTGGATGACAAGTCTAGGGCTAATCTAGTACAAATTAAAGGGAGGTTTTCTGTGACATCAGAAAATTTAGATCTTGTAAAGGATATTCCTGGAAGTTCAGTTTCACTTAGATCTTCACAGGGCTCATCACTGCGGAAATCTGCCAGTGTTAGTGATGGGATGTTGGATTCCGAACAAATGCCAATTAGTCAGGCCTCCCAAGATTCTGCCACCAATAACATCTCTGCATCACTTCTTATGACTCACCTTCAAAATCTTCTCCAGCAAACATTAATGCAACAGGATCTTATAGTGAATCTGTTGAGTAGCTTGCAATCTGCTGAAGGTATTGAAGTTTCACAGAATGGAAAGTTGCCACTAATACCTTGCAGTTCACAAATAAATAGGGGTGTCGACACAGCAGCTGCAGGGAGGGAACGTTATCTGCTGCTCAAAATAATGGAGCTTCAGACTCGTATGGTCACTTTGACTGATGAATTGACTGCTGAGAAGTTAAAATACATGCAGTTGCAACAACAGCTAACGACTCTCCAAACTAAGGAACAAAATAGGGAGAAGGGAGAGTACGTTGCGTGA 2190 0.4452 MGGSHDQSQNFSTNPSDYKLLEEVGYGATATVYRAIYLPFNQVVAVKCMDLDRCDINLDDLRREAQMMSLVDHPNVLKAYCSFAVERSLWVVMQFMDEGSCLHLMKIAYTEGFEEEAIGSILKETLKALQYLHHHGHIHRDVKAGNILLGSSGAVKLADFGVAACLFDAGDRQRYRNTFVGTPCWMAPEVLQPSSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPSAEKLLKHSFFKHVKPPELSVKKLFADLPPLWNRVKALQLKDAAQLAMKKMPSAEEEAISQSQYQRGVSTWNFHIDDLKAQASLVRDDDDIVEMREEDQNKNNFFTNYKAGAIDSEKSPLNKITSQVGAIDIKQTQQNECFYKNKKIPESKIQEPALPKNIICKRNGSTSEAMTSNIQKDIIMSKIRGQTVKTRQTQSGPLLPVTVLNHFKSEREQTSERLENGNQLPGEKNNREVRRPPNFSGPLMLSARASANSLSAPIKSSGGFRDSLDDKSRANLVQIKGRFSVTSENLDLVKDIPGSSVSLRSSQGSSLRKSASVSDGMLDSEQMPISQASQDSATNNISASLLMTHLQNLLQQTLMQQDLIVNLLSSLQSAEGIEVSQNGKLPLIPCSSQINRGVDTAAAGRERYLLLKIMELQTRMVTLTDELTAEKLKYMQLQQQLTTLQTKEQNREKGEYVA 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00034 729 Gene3D Phosphorylase Kinase; domain 1 6 95 - -
Viun6g00034 729 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 9 702 IPR047173 GO:0043539
Viun6g00034 729 MobiDBLite consensus disorder prediction 569 592 - -
Viun6g00034 729 MobiDBLite consensus disorder prediction 570 592 - -
Viun6g00034 729 SUPERFAMILY Protein kinase-like (PK-like) 16 339 IPR011009 -
Viun6g00034 729 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 99 329 - -
Viun6g00034 729 Pfam Protein kinase domain 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g00034 729 FunFam Serine/threonine-protein kinase BLUS1 7 95 - -
Viun6g00034 729 MobiDBLite consensus disorder prediction 482 512 - -
Viun6g00034 729 Gene3D Transferase(Phosphotransferase) domain 1 99 331 - -
Viun6g00034 729 Coils Coil 691 718 - -
Viun6g00034 729 SMART serkin_6 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g00034 729 CDD STKc_OSR1_SPAK 16 279 - -
Viun6g00034 729 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Viun6g00034 729 ProSiteProfiles Protein kinase domain profile. 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00034 Viun-Chr6 848025 869448 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00034 7 720 MAP Kinase Kinase Kinase Kinase AT4G24100 60.894 0.0 849
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Viun6g00034 Pkinase 1.6e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00034 - - vun:114187757 1385.16