Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00010 ATGTCCTCCAACCGTGTGTTCCAGCTTAAGCTTCATCCCTTAACAGGTAACTCTGAATGGATAGTCATTGAAGACAATGACGAGAGCTTCGACCAGAATTTCCACAAGCCCTTCCTTGCCACGACATCGTATTTGGACATGCTTAATGACTCCACCAGAAACGAGGCATTTCGCCAAGCCATTCAGAAAACCATCACCAAACCTTGCCATGTCCTCGATATCGGTGCTGGAACTGGGTTGCTTTCGATGATGGCTGCACGTGCCATGGGTGACGAAGGGAAGGTCACAGCTTGTGAATCTTACCTTCCCATGGTGAAGCTGATGAAGAAGGTGTTGCGCCTTAATGGCATGGAGGGAAGAGTCAAAATCATCAACAAGCGCTCTGAGGAACTCCAAGTTGGTCTTGATATCCCTTCGCGAGCACATGTTCTTGTAAGCGAGATACTTGATTCAGAGCTACTGGGTGAGGGGCTCATACCGACCCTACAACATGCACATGACAATTTGTTGGTGGAAAATGCCATGACTGTGCCTTATCGAGCAACTATATATGGACAGCTGGTTGAAAGCACATTCTTATGGAAGTTGCATGATTTTCATAACAACGAGGCTACTGTATCTGATAGCATTCGACTTACTCCTCCAGGACTCGATAGTGTGCTAAGTATCAAACGTCAGCAATATGCGATGCATGTCGATCCTATACAGGAAGAAATAACATTGCTTTCAGAACCCTTCAAAATTTTTGAATTTGATTTTTGGAAACGGCCAGAGAGTTATGGAGAAACTGAGTTGTGTGTAAAGGCAACGAATGATGGGAGAGTTCATGTTGTGGTCTCTTGGTGGGTACTCCAACTTGATCAGGAAGGGACTATCTATTATTCCACTACTCCAAGGTGGATAAGCTCACCGAAAATTACAAGTCCTGTTGGTTGGTGTGACCACTGGAAACAATGTGTTTGGTTTGTTCCAGGCAGTGGTATTTCCATACTCAAAGGGGAAGAAATTCATTTACTTGCTACTCATACTGAAACTAGTTTCTCATATAATTTTGATACCGTAGTACCAACTACTGAGACTTTGAACCATAGGTGCATGACAGGAGATTTTCAGCTTGTACTACCACCAGAAAGAGCTGCAATTTATGCAGATAAAGAATGGAGGTTTTCAATGTTGAAAGCAGTACAAAGCATGGGAAAAGATCGCTTGTTATGCTTGGTTGTAGATGATAGTGTCTTTTTACCACTTCTTGTAGCAAAGCTTTCAGAAGCAAGTGTAATGTCATTACTTCCTGGGTTGAGGGAAAGGGGCCTCCAATACCTGCAAGCAGTTGCCCATGCAAATGGTTTGTCACATAGTTGCATTGAAGTTCTTGAAAAAAACGTGCAACATTTAAACATGCATGATATACATCAGAAAAAGGTTGATCTGTTAATAGCTGAACCTTTCTATGTAGGACACGATAGTATGCTGCCATGGCAGAACCTACGATTTTGGAGGGATCGCACTACACTTAATGATATACTCTCTGAAGATGCTCTGATAATTCCTAGTAAAGGAATATTGAGAGCCTGCGCCATGTCTCTTCCTGATCTTTGGAAAAGTCGTTGTTCTCTGAGTATTATTGAAGGTTTTGACCATTCGGTTGTAAATGCTACATTGGGGGCCTGCGGTCATCTACCGGAACTAGAAGAATGTCCCTGTCTCCCTTTTTTCATCTGGCAGTGTGGAGAATTTGATGTGCTCAGCGAGACATATGACGTGATGGAGTTTGATTTTTCAAAACAAATATGCGAATGTCAAGGAAAATCTCAGGTTAAGTTCACCAAGAGTGGGGTATGTCACGGATTTGTATTATGGATTGACTGGGTGATGGATTTGCAGAATTCTATTGTGATTTCAACTGGTCCAGATTGCAGATAG 1923 0.4269 MSSNRVFQLKLHPLTGNSEWIVIEDNDESFDQNFHKPFLATTSYLDMLNDSTRNEAFRQAIQKTITKPCHVLDIGAGTGLLSMMAARAMGDEGKVTACESYLPMVKLMKKVLRLNGMEGRVKIINKRSEELQVGLDIPSRAHVLVSEILDSELLGEGLIPTLQHAHDNLLVENAMTVPYRATIYGQLVESTFLWKLHDFHNNEATVSDSIRLTPPGLDSVLSIKRQQYAMHVDPIQEEITLLSEPFKIFEFDFWKRPESYGETELCVKATNDGRVHVVVSWWVLQLDQEGTIYYSTTPRWISSPKITSPVGWCDHWKQCVWFVPGSGISILKGEEIHLLATHTETSFSYNFDTVVPTTETLNHRCMTGDFQLVLPPERAAIYADKEWRFSMLKAVQSMGKDRLLCLVVDDSVFLPLLVAKLSEASVMSLLPGLRERGLQYLQAVAHANGLSHSCIEVLEKNVQHLNMHDIHQKKVDLLIAEPFYVGHDSMLPWQNLRFWRDRTTLNDILSEDALIIPSKGILRACAMSLPDLWKSRCSLSIIEGFDHSVVNATLGACGHLPELEECPCLPFFIWQCGEFDVLSETYDVMEFDFSKQICECQGKSQVKFTKSGVCHGFVLWIDWVMDLQNSIVISTGPDCR 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00010 640 FunFam Protein arginine N-methyltransferase 37 179 - -
Viun6g00010 640 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 44 366 IPR029063 -
Viun6g00010 640 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 358 640 IPR025799 GO:0016274|GO:0018216
Viun6g00010 640 Gene3D Vaccinia Virus protein VP39 38 179 IPR029063 -
Viun6g00010 640 Gene3D - 521 640 - -
Viun6g00010 640 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 23 352 IPR025799 GO:0016274|GO:0018216
Viun6g00010 640 FunFam Protein arginine N-methyltransferase 1.6 180 365 - -
Viun6g00010 640 Gene3D - 180 366 - -
Viun6g00010 640 FunFam Protein arginine N-methyltransferase 7 370 517 - -
Viun6g00010 640 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 439 638 IPR025799 GO:0016274|GO:0018216
Viun6g00010 640 CDD AdoMet_MTases 71 146 - -
Viun6g00010 640 Gene3D Vaccinia Virus protein VP39 371 517 IPR029063 -
Viun6g00010 640 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 438 637 IPR029063 -
Viun6g00010 640 PIRSF Arg_N-mtase 4 639 IPR014644 GO:0006479|GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00010 Viun-Chr6 249019 255544 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00010 22 184 C2H2 Transcription Factor Family AT3G12270 29.070 2.44e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00010 K11438 - gmx:100785846 1152.5