Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00009 ATGTCCTCCAACCGTGTGTTCCAGCTTAAGCTTCATCCCTTAACAGGTAACTCTGAATGGATAGTCATTGAAGACAATGACGAGAGCTTCGACCAGAATTTCCACAAGCCCTTCCTTGCCACGACATCGTATTTGGACATGCTTAATGACTCCACCAGAAACGAGGCATTTCGCCAAGCCATTCAGAAAACCATCACCAAACCTTGCCATGTCCTCGATATCGGTGCTGGAACTGGGTTGCTTTCGATGATGGCTGCACGTGCCATGGGTGACGAAGGGAAGGTCACAGCTTGTGAATCTTACCTTCCCATGGTGAAGCTGATGAAGAAGGTGTTGCGCCTTAATGGCATGGAGGGAAGAGTCAAAATCATCAACAAGCGCTCTGAGGAACTCCAAGTTGGTCTTGATATCCCTTCGCGAGCACATGTTCTTGTAAGCGAGATACTTGATTCAGAGCTACTGGGTGAGGGGCTCATACCGACCCTACAACATGCACATGACAATTTGTTGGTGGAAAATGCCATGACTGTGCCTTATCGAGCAACTATATATGGACAGCTGGTTGAAAGCACATTCTTATGGAAGTTGCATGATTTTCATAACAACGAGGCTACTGTATCTGATAGCATTCGACTTACTCCTCCAGGACTCGATAGTGTGCTAAGTATCAAACGTCAGCAATATGCGATGCATGTCGATCCTATACAGGAAGAAATAACATTGCTTTCAGAACCCTTCAAAATTTTTGAATTTGATTTTTGGAAACGGCCAGAGAGTTATGGAGAAACTGAGTTGTGTGTAAAGGCAACGAATGATGGGAGAGTTCATGTTGTGGTCTCTTGGTGGGTACTCCAACTTGATCAGGAAGGGACTATCTATTATTCCACTACTCCAAGGTGGATAAGCTCACCGAAAATTACAAGTCCTGTTGGTTGGTGTGACCACTGGAAACAATGTGTTTGGTTTGTTCCAGGCAGTGGTATTTCCATACTCAAAGGGGAAGAAATTCATTTACTTGCTACTCATACTGAAACTAGTTTCTCATATAATTTTGATACCGTAGTACCAACTACTGAGACTTTGAACCATAGGTGCATGACAGGAGATTTTCAGCTTGTACTACCACCAGAAAGAGCTGCAATTTATGCAGATAAAGAATGGAGGTTTTCAATGTTGAAAGCAGTACAAAGCATGGGAAAAGATCGCTTGTTATGCTTGGTTGTAGATGATAGTGTCTTTTTACCACTTCTTGTAGCAAAGCTTTCAGAAGCAAGTGTAATGTCATTACTTCCTGGGTTGAGGGAAAGGGGCCTCCAATACCTGCAAGCAGTTGCCCATGCAAATGGACACGATAGTATGCTGCCATGGCAGAACCTACGATTTTGGAGGGATCGCACTACACTTAATGATATACTCTCTGAAGATGCTCTGATAATTCCTAGTAAAGGAATATTGAGAGCCTGCGCCATGTCTCTTCCTGATCTTTGGAAAAGTCGTTGTTCTCTGAGTATTATTGAAGGTTTTGACCATTCGGTTGTAAATGCTACATTGGGGGCCTGCGGTCATCTACCGGAACTAGAAGAATGTCCCTGTCTCCCTTTTTTCATCTGGCAGTGTGGAGAATTTGATGTGCTCAGCGAGACATATGACGTGATGGAGTTTGATTTTTCAAAACAAATATGCGAATGTCAAGGAAAATCTCAGGTTAAGTTCACCAAGAGTGGGGTATGTCACGGATTTGTATTATGGATTGACTGGGTGATGGATTTGCAGAATTCTATTGTGATTTCAACTGGTCCAGATAGGAAGTATTGGAAGCAGGGAGTTAAGCTTCTTGGAACACCTAGAACAGTAGACCCTCAAAGCTTGACAAGTGTCCAACCTTGTTCTGCAGTTGTCGAAGCTTGTTTTAGCCCATTAAAGGGGGAACTCAAAATTATACTTGATTTTTTATGA 1956 0.431 MSSNRVFQLKLHPLTGNSEWIVIEDNDESFDQNFHKPFLATTSYLDMLNDSTRNEAFRQAIQKTITKPCHVLDIGAGTGLLSMMAARAMGDEGKVTACESYLPMVKLMKKVLRLNGMEGRVKIINKRSEELQVGLDIPSRAHVLVSEILDSELLGEGLIPTLQHAHDNLLVENAMTVPYRATIYGQLVESTFLWKLHDFHNNEATVSDSIRLTPPGLDSVLSIKRQQYAMHVDPIQEEITLLSEPFKIFEFDFWKRPESYGETELCVKATNDGRVHVVVSWWVLQLDQEGTIYYSTTPRWISSPKITSPVGWCDHWKQCVWFVPGSGISILKGEEIHLLATHTETSFSYNFDTVVPTTETLNHRCMTGDFQLVLPPERAAIYADKEWRFSMLKAVQSMGKDRLLCLVVDDSVFLPLLVAKLSEASVMSLLPGLRERGLQYLQAVAHANGHDSMLPWQNLRFWRDRTTLNDILSEDALIIPSKGILRACAMSLPDLWKSRCSLSIIEGFDHSVVNATLGACGHLPELEECPCLPFFIWQCGEFDVLSETYDVMEFDFSKQICECQGKSQVKFTKSGVCHGFVLWIDWVMDLQNSIVISTGPDRKYWKQGVKLLGTPRTVDPQSLTSVQPCSAVVEACFSPLKGELKIILDFL 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00009 651 CDD AdoMet_MTases 71 146 - -
Viun6g00009 651 Gene3D - 180 366 - -
Viun6g00009 651 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 23 352 IPR025799 GO:0016274|GO:0018216
Viun6g00009 651 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 542 620 IPR025799 GO:0016274|GO:0018216
Viun6g00009 651 Gene3D Vaccinia Virus protein VP39 38 179 IPR029063 -
Viun6g00009 651 FunFam Protein arginine N-methyltransferase 37 179 - -
Viun6g00009 651 FunFam Protein arginine N-methyltransferase 1.6 180 365 - -
Viun6g00009 651 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 468 624 IPR029063 -
Viun6g00009 651 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 44 366 IPR029063 -
Viun6g00009 651 Gene3D - 484 650 - -
Viun6g00009 651 FunFam Protein arginine N-methyltransferase 1.6 484 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00009 Viun-Chr6 248922 255544 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00009 22 184 C2H2 Transcription Factor Family AT3G12270 29.070 2.70e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00009 K11438 - gmx:100785846 1153.27