Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00005 ATGTTTGAGAACAATGAATCTCCCTCTCAAGGATTAACGCAACTTTCTCAGACTTCAAAAAATACTGTCGAAGAGGACTTTTTAACACTTACACCTAGAACCAACATTCAAGGTCTAAAAGATTGTAAAGAGGTCGCCACTTTCATATTGTTTGGAACAATTAAGCATATCTTGGTTGACGATGACTGGTGGTATACTGCTTGTGTGTGCAACAAAGCTGTTTATCCAGATTCCAAGATGTTCTTTTGTGAGAAGTGTAACAAGCATGTTATAAAAGTCTTTCCAAGATATAGGATTAAGATCCGAGTTATGGACTCTTCCGATTCAACCACATTTGTCCTCTTTGATAGGGATGCAACTACCCTTTTCAAAAAAACTTGTGCTGATATGTTAGACGCTCATGATAAGATGAATTCTTCTGGAAATTTGCCTAAGCAGTTTGATGAGTTAGTTGATAGAAGTCTGCTTTTTAAAGTGGAAAGTAGGAACGATCAGAATTTCAAACTTGAACAGTCTTTCAGAGTGAAGAAAATATGTGTTGATGATGATATCATTGACAAATTCAATGATTCTTCGTTGAAATCTGTGGATGTTTATGCTGGGAATGGTGAGTTTAGCAGGGAAAAAATGCGTATAGTGAATGAGTCCACCGTTAATATTTCAGAGGATTTATTAGTCCGATTTACCAAAGAAACAATTGAGTCTGGATCCCAATCACCTGAACTAATCCAAGATAATCCAACCAACGATGATGCTAGCAGTTCACATAAGAGAGAATCTGGAAAGAAGACTGCATCACTTGAATCCATCGAAGAAGACAATGTTCCATTGAAGCTTTTAAAAAGAAATATTAAGAAGGAAAAATCAGCGATTTGA 876 0.3619 MFENNESPSQGLTQLSQTSKNTVEEDFLTLTPRTNIQGLKDCKEVATFILFGTIKHILVDDDWWYTACVCNKAVYPDSKMFFCEKCNKHVIKVFPRYRIKIRVMDSSDSTTFVLFDRDATTLFKKTCADMLDAHDKMNSSGNLPKQFDELVDRSLLFKVESRNDQNFKLEQSFRVKKICVDDDIIDKFNDSSLKSVDVYAGNGEFSREKMRIVNESTVNISEDLLVRFTKETIESGSQSPELIQDNPTNDDASSSHKRESGKKTASLESIEEDNVPLKLLKRNIKKEKSAI 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00005 291 MobiDBLite consensus disorder prediction 235 269 - -
Viun6g00005 291 Gene3D - 12 190 IPR012340 -
Viun6g00005 291 SUPERFAMILY Nucleic acid-binding proteins 33 166 IPR012340 -
Viun6g00005 291 MobiDBLite consensus disorder prediction 251 269 - -
Viun6g00005 291 Pfam Replication factor-A C terminal domain 50 175 IPR013955 -
Viun6g00005 291 MobiDBLite consensus disorder prediction 235 250 - -
Viun6g00005 291 CDD RPA1_DBD_C 48 178 IPR047192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00005 Viun-Chr6 206294 207616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00005 49 175 Core DNA Replication Machinery Family AT5G08020 28.571 9.74e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00005 - - vun:114187459 550.051