Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g04187 ATGAAATCACAGGCACAGTTTCCAGAAAAGATATCAGGGCAGGTACCTAATCAATCTGGGTCTCAGTTGCCTGGCCTGATTCAGCTGAATGGAAATGCCCTGCATCAAATGCCAAATTTAGGTGTTTTTCCAACTATGGACGCTGAATTTCTTAGAGCACGATCTCTTACACTGGAAAAAATATGTAATATATTACTGAAGCGGTACCAGCATCCTGTTACAGAAGCACATAAAAGGAAGGTTAAGGATCTTGCAAAACGTCTCGAGGAGGGCCTGTTAAAAGCTGCTATATCTAAGGAGGACTACATGAACTTAGACACGCTAGAGAGTCGCTTATCTAATTTCCTTAGAATGTCATCTATGACTACTAACAACCAACAACATCCTCAGCTTGTTAGCTCTTCTCCAATTGCTACAATGATACCAACCCCTGGCATGTCACATATTACAAATTCCACCATGATCACGGCATCTTCTGTGGATACGTCGATGATTGCTGCCAGTGGATCTAACAGCATATCATCCCCATCAGTCAATAGTGTAAACATGTTACCAGCAGGTGGCATGCTTGGCAGCACCTTAAATAGATCTGATGGTTTGTCGAATGGTTATAAGCACTCTGCTACAAGTTTTTCCATTGGTTCAGGAGGAAATATGTCATCCGTTGGGGTGCAAAGAGTTACTAGTCAGATGATTCCAACTCCAGGATTTAGTGTCAGCAATAATCATAATCATAATCATTCATATACAAATTTGGATCCTTCAAGTAACAACAGTTCTTTTTCCGGTGTTGATTCTACATTATTATTGCCGTCACAGTCTCAGCCACAGCGGCACCAGAAGCTGCAAGATAGTGACCACAACAATCATGCATTGCACAACCTTGGCAGTCAAATTGATGGTGGAAGGAGATCTGATTTACTGCAAAACACATTTGCATTTCCAAATGGTTCTATAAATAGTGGGCTAGGTTTGATTGGAAACAACATACAAATTGCAAATGAACTCGGGACTGAAGACTACACTTCAGCATACTCTAATTCCCCCAAGAACTTACAGCAGCTATTTGATCAAAATCAACAACCAGTAGTGCAGGGTGACAAATATGGATTGATTAATGTTGACACTTTTAATTCTGGAAGCTTTTACGCATCTGCAACATCCTCGGGCTCTATGTTGAACACTCAGAACATGACTGCTGTAAAATTGCCCTCAATACCCATTTCTAGCTCACTCATAAGTGGTCATTCGAATTTGCACAGTATGAATCATACTGCTCATCACAACTCCCAAGCAATAAATTCGTTGAAAAATTTAAAATTCCAGCCTTCCCTGACTTCAAGAAATGACCGTGTAAATACTCAACATCAATATGAGCAAAGACCCCAACAATGTCACCAGTCAGATTGGTATGCTCCACAGCAATTTCAGCTGAATCAGCAAAGTCAGCAACCTCAGCATTTGGTCAACAATGATGCCTTCCCTCAGTCTCAACTCTCCTCCGGTCTAGACAATAACATAAAGTCTGAGCCTGGTGTTGAACCATATAAAGAAATTCTCTCTTCTCAGCTTTCTCAGCAGTTCCATACATCTGAAATGCACAACCAGTTCCAACAGATTTCTTCTAAAGACTGCTCTAAGGCTGCTCAGCAGCAGGTTTCATTGGATCAGCACAACTCATCCTCATCACCACCTCAAATTTCTCAACAAATGTTGCATCCTTATCAATTGGTTTCAGAGTCTCAAAATAATTTTAACTGTCTTTCAGTTGGATCACAATCCAAATCCATACTTAAGAATCAGTGGTCTCAATCACAGGATGAAAATGATGTTCCTAAGGGTATGTCACATGAACAGCATCTTCCCATTGATTTTCATCAAAGAATACCAAGGCAAGATGAAACTCAATGCTGTAATTTACCATTAGATGGATCTATTATTGGTCAAGCTGTTGCCTCTAGAAGCTCAGTTCAGCTGCTAGACCCAATGAATTCTATAGAGAAGGAACACAGAAATCAACAGAAGTGGCTTTTATTTTTGTTTCATGCTCGATGCTGTTCTGCCCCAGAAGGGCGATGCCAAGAACGCCATTGTTCTATTATGCAGAAGTTATGTAATCATGTAGATAGATGCATTATATCTCATTGTTCATATCCTCGTTGTGGTCGTACCAGGAAATTGCTTCATCATTACATAAAATGCAGGAATCCACGTTGCCCTGTTTGCATTTTAGTAAGGAAGTATAGGCATGCATTTCAACAGAAGTCCCGAGTTCAGTCAGATCTTGAACCATGTTTGCCGGTTGCTTTAAATGTATCCACCGAAACCTTTAATGCAGTGGGCCTTTCACCTAGATTGATCTCCAAGTCTCAACTAGTGGTTGAAACTTCAGAAGACCTACCAGCTCCAAAGCGTATGAAAACTGAGCAATACACCCAGTCCACTAATCCTGAATATGATAATGCTGCCTCATCTGCTCTTCCAAGCTGTGAATTACGAGATTCAAAGGATACTCAATGCCAATCCTACTCCATTGGGGATATGTCTGTATCAATTAAATCTGAGCTTAATGAAGTTAAAGCAGAAGTTCTGGCGCACTCAATGCATGAAAATCTCAGCGAGACGAGAATGGAGGAGGATAATGCACATGACAAAAGGCCTGCTGGTAAGCCTGTCACATACAATGAGCCTGCTAATATAGCTAGGTTGGAGAATATTAGAACTGAGAAAGAAAGTGGTCAAGATAAGCAAGAAAATGTGACCCAACCATCTGAACCTGGAGCTGCAACCAAGTCTGGTAAGCCAAAAATAAAGGGGGTCTCATTGACCGAGCTGTTTACTCCTGAGCAAGTCAGGGAACATATCACCGGCCTCAGGCAATGGGTTGGCCAAAGCAAATCAAAGGCAGAGAAGAATCAAGCAATGGAGCATTCGATGAGTGAGAACTCCTGTCAGTTGTGTGCAGTAGAGAAATTAACTTTTGAACCACCCCCTATTTATTGCACAACATGTGGTGTTCGGATTAAACGCAATAATATGTATTATACAATGGGTACCGGTGATACACGACATTATTTTTGTATACCATGCTACAATGAGCCTCGTGGAGACACCATTGTTGTTGATGGGACTTCTTTTCCTAAGTCAAGGTTAGAAAAGAAGAAAAATGATGAGGAAACAGAGGAATGGTGGGTTCAATGTGATAAATGTGAAGCATGGCAACATCAAATTTGTGCTTTATTTAATGGTCGAAGAAATGATGGTGGACAAGCTGAATATACTTGCCCTAACTGCTATATTCAAGAAGTAGAAAGAGGTGAGCGCAAGCCCTTACCCCAAAATGCTGTTCTTGGAGCCAAGGATTTACCCAGAACAATTCTCAGTGACCAAATAGAGCAACGATTATTTAGGAGACTAAAGCTTGAGAGACAAGAGAGGGCCCGACTTCAAGGGAAAAATTATGATGAGGTGCCTGGAGCTGAATCTCTTGTTATAAGGGTTGTGTCGTCTGTTGACAAGAAGTTAGAAGTTAAACAGCGGTTTTTGGAGATTTTTCAGGAAGAAAATTACCCAACAGAATTCCCATATAAATCGAAGGTAGTTTTGTTGTTTCAGAAGATTGAAGGGGTGGAAGTATGCCTCTTCGGCATGTATGTTCAAGAGTTTGGATCTGAAAGTAAATTTCCAAATCAGCGCCGGGCTTATCTTTCATATCTGGACTCTGTTAAGTATTTTAGGCCTGAGGTTAAAGCAGTGACTGGAGAAGCTCTTCGAACCTTTGTTTATCATGAAATTCTGATTGGATACCTTGAGTATTGCAAGAAACGTGGTTTCACTAGCTGCTACATTTGGGCTTGTCCGCCACTAAAGGGTGAAGATTATATTTTATATTGTCATCCAGAAATTCAGAAAACACCAAAATCTGATAAGCTTAGGGAATGGTACCTTGCTATGTTAAGAAAAGCTGCCAAGGAGAATATTGTGGTTGATCTCACCAACTTGTACGACCATTTCTTTGTATCTTCTGGTGAATGTAGGGCGAAGGTTACAGCTGCAAGGCTCCCATATTTTGATGGTGACTATTGGCCTGGGGCTGCCGAGGATTTGATTCATCAGCTTCGCCAAGAGGAAGATGGAAGAAAACAAAATAAGAAAGGAACAACTAAGAAGACTATAACAAAAAGGGCTTTAAAAGCATCTGGTCAGTCAGATCTTTCTGGAAATGCCACAAAGGATCTTCTCCTGATGCACAAACTTGGTGAAACCATTTCCCCAATGAAGGAAGATTTTATCATGGTTCATTTGCAGCATGCATGCAGTCATTGTTGTATTCTGATGGTGTCAGGCAACCGTTGGGTTTGCAGGCAATGCAAGAATTTTCAGATTTGTGACAAGTGTTATGAAGCAGAACTAAAGCGTGAAGAAAGAGAGCGGCATCCTATTAACCAGAGGGAGAAACACATCCTTTATCCTGTGGAAATTATTGATGTACCTGCCGATACAAAGGACAAAGATGAGATTCTTGAGAGTGAGTTCTTTGACACTAGGCAGGCATTTCTGAGTCTCTGCCAGGGAAATCATTATCAGTATGATACTCTAAGACGGGCCAAGCATTCCTCTATGATGGTTCTCTATCATCTTCATAATCCAACTGCTCCTGCATTTGTTACTACATGTAACATTTGCCGTCTTGACATAGAAACAGGCCAAGGTTGGCGTTGTGAAGTGTGCCCTGAATATGATGTGTGCAATGCTTGCTATCAAAAGGATGGTGGCACTGATCATCCTCATAAATTGACAAATCATCCATCAATGGCAGATCGTGATGCTCAGAACAAGGAAGCTAGGCAACTACGAGTATTACAGGTCTGA 4872 0.4107 MKSQAQFPEKISGQVPNQSGSQLPGLIQLNGNALHQMPNLGVFPTMDAEFLRARSLTLEKICNILLKRYQHPVTEAHKRKVKDLAKRLEEGLLKAAISKEDYMNLDTLESRLSNFLRMSSMTTNNQQHPQLVSSSPIATMIPTPGMSHITNSTMITASSVDTSMIAASGSNSISSPSVNSVNMLPAGGMLGSTLNRSDGLSNGYKHSATSFSIGSGGNMSSVGVQRVTSQMIPTPGFSVSNNHNHNHSYTNLDPSSNNSSFSGVDSTLLLPSQSQPQRHQKLQDSDHNNHALHNLGSQIDGGRRSDLLQNTFAFPNGSINSGLGLIGNNIQIANELGTEDYTSAYSNSPKNLQQLFDQNQQPVVQGDKYGLINVDTFNSGSFYASATSSGSMLNTQNMTAVKLPSIPISSSLISGHSNLHSMNHTAHHNSQAINSLKNLKFQPSLTSRNDRVNTQHQYEQRPQQCHQSDWYAPQQFQLNQQSQQPQHLVNNDAFPQSQLSSGLDNNIKSEPGVEPYKEILSSQLSQQFHTSEMHNQFQQISSKDCSKAAQQQVSLDQHNSSSSPPQISQQMLHPYQLVSESQNNFNCLSVGSQSKSILKNQWSQSQDENDVPKGMSHEQHLPIDFHQRIPRQDETQCCNLPLDGSIIGQAVASRSSVQLLDPMNSIEKEHRNQQKWLLFLFHARCCSAPEGRCQERHCSIMQKLCNHVDRCIISHCSYPRCGRTRKLLHHYIKCRNPRCPVCILVRKYRHAFQQKSRVQSDLEPCLPVALNVSTETFNAVGLSPRLISKSQLVVETSEDLPAPKRMKTEQYTQSTNPEYDNAASSALPSCELRDSKDTQCQSYSIGDMSVSIKSELNEVKAEVLAHSMHENLSETRMEEDNAHDKRPAGKPVTYNEPANIARLENIRTEKESGQDKQENVTQPSEPGAATKSGKPKIKGVSLTELFTPEQVREHITGLRQWVGQSKSKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCTTCGVRIKRNNMYYTMGTGDTRHYFCIPCYNEPRGDTIVVDGTSFPKSRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEVERGERKPLPQNAVLGAKDLPRTILSDQIEQRLFRRLKLERQERARLQGKNYDEVPGAESLVIRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVVLLFQKIEGVEVCLFGMYVQEFGSESKFPNQRRAYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLAMLRKAAKENIVVDLTNLYDHFFVSSGECRAKVTAARLPYFDGDYWPGAAEDLIHQLRQEEDGRKQNKKGTTKKTITKRALKASGQSDLSGNATKDLLLMHKLGETISPMKEDFIMVHLQHACSHCCILMVSGNRWVCRQCKNFQICDKCYEAELKREERERHPINQREKHILYPVEIIDVPADTKDKDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICRLDIETGQGWRCEVCPEYDVCNACYQKDGGTDHPHKLTNHPSMADRDAQNKEARQLRVLQV 1623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g04187 1623 Pfam Histone acetylation protein 1156 1378 IPR013178 GO:0004402|GO:0006355|GO:0016573
Viun5g04187 1623 FunFam Histone acetyltransferase of the CBP family 12 1430 1489 - -
Viun5g04187 1623 ProSiteProfiles Zinc finger TAZ-type profile. 665 745 IPR000197 -
Viun5g04187 1623 FunFam Histone acetyltransferase HAC1 1553 1604 - -
Viun5g04187 1623 Gene3D - 1553 1605 IPR043145 -
Viun5g04187 1623 ProSiteProfiles Zinc finger ZZ-type profile. 1554 1607 IPR000433 GO:0008270
Viun5g04187 1623 SUPERFAMILY RING/U-box 1535 1603 - -
Viun5g04187 1623 MobiDBLite consensus disorder prediction 1374 1404 - -
Viun5g04187 1623 SMART TAZ_2 667 745 IPR000197 -
Viun5g04187 1623 MobiDBLite consensus disorder prediction 872 890 - -
Viun5g04187 1623 MobiDBLite consensus disorder prediction 236 279 - -
Viun5g04187 1623 CDD PHD_HAC_like 1026 1098 - -
Viun5g04187 1623 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1051 1099 IPR013083 -
Viun5g04187 1623 MobiDBLite consensus disorder prediction 807 826 - -
Viun5g04187 1623 PANTHER CBP/P300-RELATED 80 1620 IPR013178 GO:0004402|GO:0006355|GO:0016573
Viun5g04187 1623 Gene3D - 1430 1487 IPR043145 -
Viun5g04187 1623 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1116 1552 IPR031162 GO:0004402
Viun5g04187 1623 SMART zz_5 1433 1477 IPR000433 GO:0008270
Viun5g04187 1623 SMART zz_5 1553 1599 IPR000433 GO:0008270
Viun5g04187 1623 MobiDBLite consensus disorder prediction 236 300 - -
Viun5g04187 1623 MobiDBLite consensus disorder prediction 1 22 - -
Viun5g04187 1623 Gene3D TAZ domain 662 751 IPR035898 -
Viun5g04187 1623 MobiDBLite consensus disorder prediction 872 936 - -
Viun5g04187 1623 MobiDBLite consensus disorder prediction 524 568 - -
Viun5g04187 1623 SMART KAT11_2 1149 1446 IPR013178 GO:0004402|GO:0006355|GO:0016573
Viun5g04187 1623 MobiDBLite consensus disorder prediction 807 823 - -
Viun5g04187 1623 Pfam PHD-finger 1057 1099 IPR019787 -
Viun5g04187 1623 SUPERFAMILY TAZ domain 670 748 IPR035898 -
Viun5g04187 1623 ProSitePatterns Zinc finger PHD-type signature. 1027 1098 IPR019786 -
Viun5g04187 1623 SUPERFAMILY RING/U-box 1414 1494 - -
Viun5g04187 1623 Pfam TAZ zinc finger 674 742 IPR000197 -
Viun5g04187 1623 ProSitePatterns Zinc finger ZZ-type signature. 1559 1586 IPR000433 GO:0008270
Viun5g04187 1623 ProSiteProfiles Zinc finger ZZ-type profile. 1434 1497 IPR000433 GO:0008270
Viun5g04187 1623 Pfam Zinc finger, ZZ type 1556 1597 IPR000433 GO:0008270
Viun5g04187 1623 SUPERFAMILY FYVE/PHD zinc finger 1060 1100 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g04187 Viun-Chr5 48671683 48692483 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Viun5g04187 HAT_KAT11 1.4e-30 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g04187 K04498 - gmx:100800511 2650.16