Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g04182 ATGTGGCTTCCACATCCTAAAGGAGGAGCAGGGATTAGAAAGGGAGAAGGAGGAGGCAATGGAATAGTGGCAGTGGCTATAGATAAGGATAAAGGAAGCCATTACGCTCTTAAATGGGCTGTTGACTGTCTGCTTGGCAGAGGTCAGACTTTGATTCTCCTCCACGTTATGCACGGGACATCCTCACATGTTTCCGGAGGTAGCGAGGCCGTTATATGTAACATCACCAGTTCATCTGCGTCTCCACAGAGATACCAACTTGATACCACTACCAAGGATTTGTTTCTCACTTTCCACTGCTATTGTACACGCAAAGATGTACACTGCCTTGATGTCCTGCTTGAAGACAATGATGTTGTGAAAGCAATAACAGAATACGTCTCTTATGCTGCGATTGAAAACTTGGTGATTGGTGCAACATCCAGGCATGGGTTTATTCGATTTAAGTCATCGTCAAGTGCATCAAGTAGCATATCAAAGGGGGCGCCGGACTTTTGTACCGTGTTTATCATTTCAAAGGGAAAAATCTCGTCAGTTCGGAATGCTACTCGACCAGCCGCACATACATCCCCACTTCTGATCCATATACGGAATCTAAAGAACAAGGACGAAAATCATCAAGAAATACCCTTCAGAAATACGAATACCAGAGACAGGACGTCATTCAAACCACAGAGCTGGCACGAAGAATCTATTCAGTCTCCATTTTCAAGAGGAAGAGGCACGACTGGATTGTCATGCGTGGACTTCCCAGACTCAGATACAGAAATATCATTTGTAAGCTCCGATAGGCCTAGCAGTTGTCGTTCGTCCTCCGTTTATGACTATATTGATGCAAGCCGAACTCCGCGGGTTTCTACCAGTTCAGATCATAGCTTTGGATCAACCCGATTGGGACTCAAGTTCAATGACCTCGGTTCACCCGATACGTCATTTTCTCACGAAAGCAGTAGAACATCATTCTCATATTCATCACAGAGCATGGATGAAGAAGCAGCAGAAGCTGATATGAAGAGGCTGAAGCTTGAGTTAAAGCAAACGATGGATATGTACAGTACAGCATGCAGAGAAGCACTAACAGCCCAGCATAAGTTAGTAGAGTTGACACACTGGAGAATTGAGGAAGAAAGAAAATTAGAAGAGGCACGATTGGCTGAGGAAGCTGCGCTGGCAATTGCAGAGAAAGAGAAAGCAAGATGTAGAGCAGCCATGGAAACTGCTGAAGCATCGAAGAAAATTGCTCAGGTTGAAACACACAGAAGAGCGACTGTTGAAGTTAAAGCTCTTAAAGAAGCAGAGGAAATGAGGAAGCTTTTGGACAATCTAGCCCAAACTGATGTAAGATATAGGAGATACTGTATAGAGGAGATTGAAGCAGCCACGAACTTCTTTTCTGAATCCCAGAAAATCGGAGAAGGAGGTTATGGCCCTGTTTTTAAATGTTTCCTTGATCACACTTCGGTTGCTGTCAAGGTTCTACGTCCAGATGCTGCTCAAGGGAAGGCACAGTTTCAGCAAGAGGTTGACATTCTGAGCTGCATGCGACACCCAAACATGGTGCTTCTTCTGGGAGCATGTCCGCAGTATGGCATATTGATATATGAATATATGGCTAATGGAAGCCTGGAAGATTGTCTGTTTCGAAAAAGGAAGAACAAGGTTCTGTCTTGGCAGCTGAGGTTGCGAATTGCTGCAGAGATAACGACGGGCCTTCTATTCCTGCATCAGACCAAGCCTGAACCTTTAGTGCACCGTGATCTGAAACCAGGCAACATTTTGCTAGACCAGAATTATGTGAGTAAGATAAGCGATGTTGGATTAGCAAGGCTTGTCCCAGCAGTAGCTGAAGACGTAACACAATGCTGCATGACATCAGCAGCTGGAACATTTTGTTATATTGATCCTGAGTATCAGCAAACAGGAATGCTTGGCGTAAAGTCGGATGTTTATTCTCTAGGGATAATTTTTCTTCAACTATTGACTGGCAGACCTCCAATGGGATTAGCTCACCATGCCGCCCAGGCTATAGAGAAAGACACCTTTGAGGAAATGCTGGACCCATCTGTAACCGATTGGCCTCTTCAACAAGCCTTGTGCCTTGCAAAGATAGCAGTCAAGTGTGCGGAACTCAGGCGAAAAGATAGGCCAGACCTTGCCCAAGTGGTGTTGCCAGAGCTCGATAAATTGAGAGACTTTGCAGAAGAAAACATGACAGTGCGATTGTTTCCCATCAATTTAGAATGCACTGCGCCCTCACCCTGCCACAGTGAAACTTCTGTGCAACAGGATGTGATGAGCGACCAACGCCTTGTACATTCCGTAGGCTCATCAGCTCCATCGACTCCCACAGAAGAAAAACATTAA 2364 0.4518 MWLPHPKGGAGIRKGEGGGNGIVAVAIDKDKGSHYALKWAVDCLLGRGQTLILLHVMHGTSSHVSGGSEAVICNITSSSASPQRYQLDTTTKDLFLTFHCYCTRKDVHCLDVLLEDNDVVKAITEYVSYAAIENLVIGATSRHGFIRFKSSSSASSSISKGAPDFCTVFIISKGKISSVRNATRPAAHTSPLLIHIRNLKNKDENHQEIPFRNTNTRDRTSFKPQSWHEESIQSPFSRGRGTTGLSCVDFPDSDTEISFVSSDRPSSCRSSSVYDYIDASRTPRVSTSSDHSFGSTRLGLKFNDLGSPDTSFSHESSRTSFSYSSQSMDEEAAEADMKRLKLELKQTMDMYSTACREALTAQHKLVELTHWRIEEERKLEEARLAEEAALAIAEKEKARCRAAMETAEASKKIAQVETHRRATVEVKALKEAEEMRKLLDNLAQTDVRYRRYCIEEIEAATNFFSESQKIGEGGYGPVFKCFLDHTSVAVKVLRPDAAQGKAQFQQEVDILSCMRHPNMVLLLGACPQYGILIYEYMANGSLEDCLFRKRKNKVLSWQLRLRIAAEITTGLLFLHQTKPEPLVHRDLKPGNILLDQNYVSKISDVGLARLVPAVAEDVTQCCMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIIFLQLLTGRPPMGLAHHAAQAIEKDTFEEMLDPSVTDWPLQQALCLAKIAVKCAELRRKDRPDLAQVVLPELDKLRDFAEENMTVRLFPINLECTAPSPCHSETSVQQDVMSDQRLVHSVGSSAPSTPTEEKH 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g04182 787 ProSiteProfiles Protein kinase domain profile. 464 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g04182 787 Coils Coil 330 350 - -
Viun5g04182 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 582 594 IPR008271 GO:0004672|GO:0006468
Viun5g04182 787 Coils Coil 376 410 - -
Viun5g04182 787 CDD STK_N 22 174 - -
Viun5g04182 787 MobiDBLite consensus disorder prediction 214 240 - -
Viun5g04182 787 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 436 536 - -
Viun5g04182 787 FunFam U-box domain-containing protein 51 537 736 - -
Viun5g04182 787 MobiDBLite consensus disorder prediction 309 328 - -
Viun5g04182 787 Gene3D Phosphorylase Kinase; domain 1 442 536 - -
Viun5g04182 787 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 25 152 - -
Viun5g04182 787 Gene3D Transferase(Phosphotransferase) domain 1 537 741 - -
Viun5g04182 787 MobiDBLite consensus disorder prediction 765 787 - -
Viun5g04182 787 MobiDBLite consensus disorder prediction 765 781 - -
Viun5g04182 787 Pfam Universal stress protein family 22 155 IPR006016 -
Viun5g04182 787 Pfam Protein kinase domain 465 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g04182 787 SMART serkin_6 464 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g04182 787 PANTHER OS02G0152300 PROTEIN 23 767 - -
Viun5g04182 787 Gene3D - 23 208 - -
Viun5g04182 787 SUPERFAMILY Protein kinase-like (PK-like) 448 722 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g04182 Viun-Chr5 48647594 48652151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g04182 1 760 Receptor kinase-like Gene Family AT1G78940 56.250 0.0 811
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Viun5g04182 Pkinase 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g04182 - - gmx:100801601 1190.64