Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g04181 ATGTTGGTTAAAATTCAAACAAACTGGTTTGTCCCTGTTGCAGTCCCATTCCCAGTCCCACACAAGGTAGAGGGTTGTTATGTGATGAGTAAGTGCCTGTTATCCACGCATCCTCCTACACCATTTGAAGTCGATAATGATAAATCGAGGAGAAGAAGAAGAAGAAGAAGAAGAAGATCAAATTGGAGTTGTGGTTGTGGTTCGGAGGAGGCACATGCACAGAGACAGGATCTCTCTGAATCTGAATCTGAATCCAAACGGGAATTGGAAGTGCTGGAAGCTCGCAGGGCCATTTCAAGTTATCTGGGAGAGTTGGGAGTGTCAGAGGAGGAATCGTTGTCCATCGCGTGGAATTGCCCGGGGTATGTGAAGATGTTGGTGGAAGGTGTGAGGGATTTGGATGAGTGGGGGTGGGAGGCAGATGAAGAAATTGCTGGATTGAGCTTCAAAGACAAGATTCTTCATGTTGCCGCTCAAAAAGGGGACAAGGGGAAAATTGCCTACTTAGAGACTCTGGGTCTCACTCTCTCTTGGTCTATCAACGTCGCCGGATATCTCTCCGCTCACACCCTCCCCTCTCTCATGCACAAGGTTACGCGCATCAAGCAACTCTTCTTTTCTCCTTCCGATAACGATAACAATAACCACCCCTCGTTGCTCATGAGAAACATTCGCCTCACTATGCGCCACTTGTCCATTTCAATTGACGAAGACCTGCAACGCACTTTCTCCTTTTTCGAAAAGCTTCAAGCAAAGCCTGGTGGCCTAAACATCTTGGCTTCCCAAGATTCTGCTTTCTCTTCCTTAATCCAATCCTTCCCTCGTATGCTTCACTTATCCGTAGACAACCACTTAACACTCATACTGGATTCTCTCCTCAACTTTGGAATCCCCACATCTCGCGTCTCACACATAATACTTGCTTTCCCTCCTCTTCTCTTCTGGAATCATCAAATCCTGCAAACTAGACTCCTCGCCGTCAAGCAGATTAACGTGGCTGATCAAGATTATGCCAAGTTGCTGCTAAAATATCCTTGGCTTCTGTCGACAAGTATACAAGAAAATTATGTAGAGCTCCTTGCTTTTTCGTATTCTATCAAGGTTCCAAAGACACAGATAGACCGTGCAATTGAAAGCCACCCTCATCTATTGAGCTGTTCAACTAGCAAGCTGGAGTTGATGGTAGATCAGTTTGCTAAACTTGGAGTTCGGAAGAAAAAGTTAAGTCAGGTTATTGCTAAAAGTCCTCAACTACTACTACGGAAGCCCAAAGACTTTCTACAGATTGTTCTGTTGTTTGAAAATATGGATTTAGATAAAGAAACTATTGGAAGAATACTTGCCCGCTGCCCTGAAATTTTTGCTTCCAGCATTAATAAAACTTTACAAAGGAAGATTGAGTTCCTTGATAGGGTTGGCGTTCGAAAGACTTTCTGGCCTGGGGTTATCAGAAAGTATCCTGAATTACTTGTATCTGACATTGACAAAACTTTACTACTAAGGATAATGTACTTAATGAAGTTAGGTCTTTCAGAAGAAGAAATTGCATTTATGGTACGCACATTTTCTCCTCTTCTTGGGTACAGTATAGAGGGGGTTCTTAAGCCAAAAATAGAATTCCTGGTGAACTCAATGGAGAGGCCAGTTAGAGATGTGGTGAGTTACCCTCGGTATTTTAGCTATTCACTAGAGAAGAAGATAAAGCCAAGATATTGGGTGTTGAAAAGAAGGGATATTAAATGTAGCTTAAAGGATATGCTGGGAAAAAATGACGAAGAATTTGCCGCTGAGTTTATGGGTATTGGAAGGATGCCCGTCTCTCATCCTGAGTCTTCTAATGATAGCCTGTAA 1851 0.4311 MLVKIQTNWFVPVAVPFPVPHKVEGCYVMSKCLLSTHPPTPFEVDNDKSRRRRRRRRRRSNWSCGCGSEEAHAQRQDLSESESESKRELEVLEARRAISSYLGELGVSEEESLSIAWNCPGYVKMLVEGVRDLDEWGWEADEEIAGLSFKDKILHVAAQKGDKGKIAYLETLGLTLSWSINVAGYLSAHTLPSLMHKVTRIKQLFFSPSDNDNNNHPSLLMRNIRLTMRHLSISIDEDLQRTFSFFEKLQAKPGGLNILASQDSAFSSLIQSFPRMLHLSVDNHLTLILDSLLNFGIPTSRVSHIILAFPPLLFWNHQILQTRLLAVKQINVADQDYAKLLLKYPWLLSTSIQENYVELLAFSYSIKVPKTQIDRAIESHPHLLSCSTSKLELMVDQFAKLGVRKKKLSQVIAKSPQLLLRKPKDFLQIVLLFENMDLDKETIGRILARCPEIFASSINKTLQRKIEFLDRVGVRKTFWPGVIRKYPELLVSDIDKTLLLRIMYLMKLGLSEEEIAFMVRTFSPLLGYSIEGVLKPKIEFLVNSMERPVRDVVSYPRYFSYSLEKKIKPRYWVLKRRDIKCSLKDMLGKNDEEFAAEFMGIGRMPVSHPESSNDSL 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g04181 616 Coils Coil 75 95 - -
Viun5g04181 616 Gene3D Transcription termination factor 3, mitochondrial 390 602 IPR038538 -
Viun5g04181 616 FunFam Mitochondrial transcription termination factor family protein 389 602 - -
Viun5g04181 616 PANTHER CGI-12 PROTEIN-RELATED 502 599 IPR003690 GO:0003690|GO:0006355
Viun5g04181 616 Pfam mTERF 289 595 IPR003690 GO:0003690|GO:0006355
Viun5g04181 616 MobiDBLite consensus disorder prediction 43 66 - -
Viun5g04181 616 SMART mt_12 444 475 IPR003690 GO:0003690|GO:0006355
Viun5g04181 616 SMART mt_12 549 580 IPR003690 GO:0003690|GO:0006355
Viun5g04181 616 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
Viun5g04181 616 SMART mt_12 480 511 IPR003690 GO:0003690|GO:0006355
Viun5g04181 616 SMART mt_12 409 439 IPR003690 GO:0003690|GO:0006355
Viun5g04181 616 SMART mt_12 338 369 IPR003690 GO:0003690|GO:0006355
Viun5g04181 616 SMART mt_12 516 548 IPR003690 GO:0003690|GO:0006355
Viun5g04181 616 SMART mt_12 374 404 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Viun5g04181 mTERF 4.2e-90 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g04181 K15032 - gmx:100802127 848.195