Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g04163 ATGGCCATCTCGCCGTCACCATTGGCAGCGGCCACCCTTGGTGTGATGAACCTGTCGCGGTCTCCGTCAACAACGAACGATGACGACTTGGTTAATGGCTTATCAAATTTACTCAAATCAATTCCCGATAAAGGGATTAGTGGGGATGACGTTGATATATTAAAGAGGAAGAATGCATCTGGAACCAATACATATCCTCGGAGAAAGAGGTTTCTATGGGAATTTTTGCAAGATCTTACTCTTATAATCTTGGTTATAGCAGCTGTGGTGTCATTGGTACTTGGAATAAAAACAGTGGTTGTTGCTTTCTTGGGAGTGCTTGTGTATTATGGAGATGAACTGTGGGAAATGTTTGGTTATGAAGAACATCCGTATAGATTTTATACAACGGATGTTCTAGCCATTGTTTTAGTGGGATTGCTCTATGGCTTCTTCATATTACGTGCAAATGTCCCACCAGATCGGTGGTGGTTGAGATTAAAATTTCAGTTCCTTGTTGCTAGGGATCATGCATTCATTTTCATAATTGTTCAACTGGTTGTTGCTTTCTTGGGAGTGCTTGTGTACAAATTTTATGGAGATGAACTGAGGGAAATGTTTAGTTATGAAGAACATCCGTTTGGATTTGATACAATGGCTGTTCTAGCCATTGTTTTGGTGGGATTGCTCTATGGCTTCTTCATAGCCATACTATGTGGCCAAAGAATCAATGAACGCCACTATCATGTTCTTGCCAAACAAGAATCGACTAAGGAATATGTGGTAAAAGATCGAGAGCATGTAAAGAATGTGCCTCTAGTTACGTGA 807 0.4064 MAISPSPLAAATLGVMNLSRSPSTTNDDDLVNGLSNLLKSIPDKGISGDDVDILKRKNASGTNTYPRRKRFLWEFLQDLTLIILVIAAVVSLVLGIKTVVVAFLGVLVYYGDELWEMFGYEEHPYRFYTTDVLAIVLVGLLYGFFILRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLVYKFYGDELREMFSYEEHPFGFDTMAVLAIVLVGLLYGFFIAILCGQRINERHYHVLAKQESTKEYVVKDREHVKNVPLVT 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g04163 268 SUPERFAMILY Calcium ATPase, transmembrane domain M 33 200 IPR023298 -
Viun5g04163 268 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 145 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g04163 Viun-Chr5 48554027 48560016 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g04163 119 240 C3H Transcription Factor Family AT1G50440 53.125 5.90e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g04163 - - vun:114183120 523.472