Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g04147 ATGGCTTCGCCGGAGGAGAAGATAGAGCGAGATCCTTTCGACATCCTTCACCACGACGACGACGACCACACTCCCTTCGCCTCTTCCACATCCGCCACCAAAGTCCGCCCCTTCAATTTCGAGACCACCGTCGTCGATTTACGAACCTCCTCCGCCTTCAACATCAGACGCATCAGCAGGAGTATATATTTCGTCTTAATTAAGGCCAAGATCAACATCTTGCTTCCATTTGGTCCTTTCGCCATTCTACTGCATTATCTCACCGGACACCATGGATGGGTCTTCTTCTTCACGTTATTGGGTATCACTCCTTTGGCCGAACGTCTCGGCTATGCCACTGAGCAGCTTGCCTTCTACACGGGACCAACAGTTGGGGGTCTGCTTAATGCCACATTTGGCAATGCAACTGAAATGATTATATCCATTTACGCATTGAAAAGCAATATGATAAGGGTTGTGCAACAATCTTTACTTGGTTCTATCCTGTCAAATATGCTTCTAGTTCTTGGCTGTGCTTTCTTTACCGGTGGCATTGTCCATTACAAAAAAGTACAGGTTTTTGATAAGGCAGCTGCCGTTGTCAATTCTGGGTTACTCTTGATGGCTGTAATGGGAATTCTGTTTCCTGCTGTGCTTTACTTTACTCACACAGAAGTTCATGAAGGGAAGTCAGTTTTGTCTCTATCAAGATTTAGCAGCTGCATAATGCTGGTGGCATATGCAAGCTACCTTTTCTTTCAACTTAGAAGTCAGCAGAATGTTTATACTCCAGTTAATGAGGAAGGAGATAATGGTGAAAATTCTGATGAGGAAGAAGAACTTGAATTAACTCAATGGGAGGCAATAACCTGGCTTGCTATTTTGACAGCATGGGTGTCAATATTGTCTGGATACCTCGTAGATGCCATACAGGGTGCATCTGAGTCATTAAATATGTCAGTGGCTTTTATTTCTGTCATCTTGCTTCCAATTGTTGGCAATGCTGCAGAACATGCCAGTGCCATCATGTTTGCCGTAAAGGACAAGCTTGATATTACTATTGGAGTTGCCATAGGATCGTCTACACAGATATCTATGTTTGTGATCCCCTTCTGTGTGGTTGTTGGATGGTGCATGGGAAAAGAAATGGACTTGAATTTTCAACTCTTTGAGACTGCCACGCTTTTTATCACCGTGTTGGTAGTTGCATTTATGATGCAGGAAGGAACCTCAAATTATTTTAAAGGCTTGATGCTTGTGCTGTGCTATCTTATAGTTGCTGCCAGCTTTTTCGTACATGTTGACAATAATAAAAGTGGTGACTAA 1305 0.433 MASPEEKIERDPFDILHHDDDDHTPFASSTSATKVRPFNFETTVVDLRTSSAFNIRRISRSIYFVLIKAKINILLPFGPFAILLHYLTGHHGWVFFFTLLGITPLAERLGYATEQLAFYTGPTVGGLLNATFGNATEMIISIYALKSNMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHYKKVQVFDKAAAVVNSGLLLMAVMGILFPAVLYFTHTEVHEGKSVLSLSRFSSCIMLVAYASYLFFQLRSQQNVYTPVNEEGDNGENSDEEEELELTQWEAITWLAILTAWVSILSGYLVDAIQGASESLNMSVAFISVILLPIVGNAAEHASAIMFAVKDKLDITIGVAIGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMMQEGTSNYFKGLMLVLCYLIVAASFFVHVDNNKSGD 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g04147 434 Gene3D - 269 425 IPR044880 -
Viun5g04147 434 Gene3D - 122 261 IPR044880 -
Viun5g04147 434 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 48 428 IPR004713 GO:0006812|GO:0008324|GO:0016020
Viun5g04147 434 Pfam Sodium/calcium exchanger protein 93 248 IPR004837 GO:0016020|GO:0055085
Viun5g04147 434 Pfam Sodium/calcium exchanger protein 284 421 IPR004837 GO:0016020|GO:0055085
Viun5g04147 434 FunFam Vacuolar cation/proton exchanger 122 261 - -
Viun5g04147 434 NCBIfam calcium/proton exchanger 65 424 - -
Viun5g04147 434 NCBIfam calcium/proton exchanger 74 424 IPR004798 GO:0006816|GO:0015369
Viun5g04147 434 FunFam Vacuolar cation/proton exchanger 269 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g04147 Viun-Chr5 48510284 48517440 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g04147 60 433 Antiporters AT3G13320 74.667 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g04147 K07300 - gmx:100806000 716.842