Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g04145 ATGGAGTCAAGAAAAAGCGCAGTGTTGCTGATATTTCTTTCAGTTTCAATGTGGCGGGTGCAGAGTGGAAGTAGCAGTGTCATCGTGTCGAAGGATGGGAGTGGAGATTACAGAACGGTGAGTGAAGCCATTATTGAAGCTCCTGACATGAGTGACAAACCTTACACCATTCACGTTCGAGCAGGCACTTATCAAGAATACCTCTTCATTCCTTCGCATAAGACTAATATTAGGCTCCTCGGAGACGGACCTCACCACACCAAAATAGTAAGCTACCAAAGTGGTTCCACCATAGACATTCGTGGAGATGGGTTCATGGCGGCGAAGATGGGATTTGCGAACTGGGCAGGGCTAAACGCGAGCGGTGCAGTGGCGGTTCGGAACGAGGCAGACAAGAGCGTATTCTTCCAATGCTCCATCCAAGGACTCCAGGACACTCTGTGGGCGGTTTCCGGCCGCCACTTCTACAAAAACTGCGATATCTACGGCACGGTGGACTTCATCTACGGCAGCGCGGCGGCGGTGTTCCAGGACTGCATGGTGTACGCGCGGTACAGAGAGTACGTGACGTTCACGGCGCAGTCGCGAGAGGATCCGAATGAGAAGAGCGGGTTCAGTTTCCAGAGATGCGAATTCAGAATGTCGCCGGAGGATGAGAGCAGAAAGAGAGAGGTGCATGCGAGCCTCGGGCGTCCCCTGAGACCCTATTCCACCGTCGCCATTCTCCACTCTTACATTGACTCCATCGTCGATCCAAAAGGTTGGGAGCCCATGCCCCACCAGCCCACCGACAAAGTCACCTACATCGAGTTTCAGAATTTTGGGCCGGGCTCTAACACCGACGACAGAGTTAACTGGGCCGGCGTCACCGTCCTTAGCCACCCGGCCCAACTAGCCCCTTTCACCGCCTCCTATCTCTTAGACGCTGACTCTTGGATTCCCTCCACCGGAGTTCCCTACCACACTGGACTATAG 975 0.5395 MESRKSAVLLIFLSVSMWRVQSGSSSVIVSKDGSGDYRTVSEAIIEAPDMSDKPYTIHVRAGTYQEYLFIPSHKTNIRLLGDGPHHTKIVSYQSGSTIDIRGDGFMAAKMGFANWAGLNASGAVAVRNEADKSVFFQCSIQGLQDTLWAVSGRHFYKNCDIYGTVDFIYGSAAAVFQDCMVYARYREYVTFTAQSREDPNEKSGFSFQRCEFRMSPEDESRKREVHASLGRPLRPYSTVAILHSYIDSIVDPKGWEPMPHQPTDKVTYIEFQNFGPGSNTDDRVNWAGVTVLSHPAQLAPFTASYLLDADSWIPSTGVPYHTGL 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g04145 324 Gene3D - 21 324 IPR012334 -
Viun5g04145 324 PANTHER PECTINESTERASE 25 314 - -
Viun5g04145 324 SUPERFAMILY Pectin lyase-like 26 323 IPR011050 -
Viun5g04145 324 FunFam Pectinesterase 24 320 - -
Viun5g04145 324 Pfam Pectinesterase 27 309 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g04145 Viun-Chr5 48503808 48505277 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g04145 27 324 Carbohydrate Esterase AT3G05610 39.228 7.78e-74 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g04145 K01051 - gmx:102665195 502.671