Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g04124 ATGCTGATCAACGTTAAGCAATCCACCATGGTGCGCCCGGCGGAGGAGACGCCGCCCAAGGCGCTGTGGAATTCCAACGTCGATTTGGTGGTGCCAAACTTCCACACGCCCAGCGTCTATTTCTACAGGCCAAACGGTGCCTCCAATTTCTTCGACACAACCGTTATGAAGGAGGCTCTCAGCAAGGCCCTCGTCCCTTTCTATCCTATGGCCGCCCGCCTCCGCCGCGACGACGACGGTCGCGTCGAGCTTTTCTGCGACGGTCAGGGAGTTCTCTTCGTCGAGGCTGACACCACCGCCGCCATCGACGACTTCGGCGACTTCTCACCCACCCTTGAGCTCCGGCAGCTCATCCCCGCCGTGGATTATTCTGCCGGGATCGAAACTTATCCGCTCTTAGTTCTTCAGGTAACATATTTCAAATGTGGAGGGGTGTCATTAGGTGTTGGTATGCAACACCACGTAGCAGATGGGGCATCGGGTCTTCACTTCATCAATGCATGGTCCGATGTTGCTCGAGGCTTGGATATTTCCCTCCCTCCGTTCATCGACAGGACACTGCTCCGTGCCCGAGATCCACCTCGTCCTGTTTTTGATCACATCGAATACAAGCCTGCACCACCCATGAACACTCCCCTGCAACCCCAAAAACCAGGCTCTGATGCCGCCGCCACCGCCGTCTCCACTTTCAAATTGACCCGCCACCAACTCAACACCCTAAAGGCCAAGTCCAGAGAGGATGGAAACTCAATCAGCTATAGCTCTTACGAGATGCTGGCTGGTCATGTATGGAGAAGTGTGTGCAAGGCAAGAGCACTCCCTCATGACCAAGAAACAAAATTGTATATTGCAACTGATGGAAGGTCAAGGCTGCAACCCCCCCTTCCCCCTGGTTACTTTGGCAATGTCATCTTCACCACCACTCCTGTAGCAGTCGCCGGCGATCTCATGTCAAAACCAACATGGTATGCTGCCAGCAGAATCCACGATGCATTGATGCGAATGGACAACGAATATTTGAGATCAGCTCTTGATTATCTAGAGCTTCAGCCTGATCTAAAAGCTCTTGTTCGTGGATCACATACTTTTCGGTGTCCCAACCTTGGCATCACTAGCTGGGTAAGGCTTCCGATCCATGATGCTGACTTTGGTTGGGGAAGACCCATTTTCATGGGACCTGGTGGGATTGCCTACGAGGGGCTTTCTTTCATTATTCCCAGCTCAACAAATGATGGCAACATGTCTGTGGCAATCGCTCTTCCTCCTGACCGAATGAAAGTGTTTCAGGATTTGTTTTATGACTTTTGA 1308 0.5237 MLINVKQSTMVRPAEETPPKALWNSNVDLVVPNFHTPSVYFYRPNGASNFFDTTVMKEALSKALVPFYPMAARLRRDDDGRVELFCDGQGVLFVEADTTAAIDDFGDFSPTLELRQLIPAVDYSAGIETYPLLVLQVTYFKCGGVSLGVGMQHHVADGASGLHFINAWSDVARGLDISLPPFIDRTLLRARDPPRPVFDHIEYKPAPPMNTPLQPQKPGSDAAATAVSTFKLTRHQLNTLKAKSREDGNSISYSSYEMLAGHVWRSVCKARALPHDQETKLYIATDGRSRLQPPLPPGYFGNVIFTTTPVAVAGDLMSKPTWYAASRIHDALMRMDNEYLRSALDYLELQPDLKALVRGSHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTNDGNMSVAIALPPDRMKVFQDLFYDF 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g04124 435 Gene3D - 219 435 IPR023213 -
Viun5g04124 435 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 432 - -
Viun5g04124 435 Gene3D - 1 205 IPR023213 -
Viun5g04124 435 FunFam Spermidine hydroxycinnamoyl transferase 1 203 - -
Viun5g04124 435 Pfam Transferase family 3 433 - -
Viun5g04124 435 FunFam Tryptamine hydroxycinnamoyl transferase 213 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g04124 Viun-Chr5 48427151 48431831 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g04124 1 434 Monolignol Biosynthesis Gene Families AT5G48930 76.728 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g04124 K13065 - gmx:100801923 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g04124 5 48427151 48431831 Viun10g02826 10 41022676 41025532 PCT