Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g04107 ATGCCTTCTGCAGAATCATTGCCACCTTCCTCCCAAACCATCTGTGTCACCGGCGCCGGTGGCTTCATCGCGTCTTGGATGGTAAAACTTCTCTTGGAGAAAGGCTACACTGTGAGAGGAACACTCAGAAACCCAGATGATCCCAAGAACGGACACTTGAAAGAGTTCGAAGGAGCCTCCGAGAGACTAACTCTGCATAAGGTTGACCTCCTTGACGTTGACTCCGTTAGATCAGTAATCCACGGCTGCCATGGCGTCTTCCACACAGCTTCTCCCGTCACCGATAACCCCGAAGAAATGGTGGAGCCAGCGGTGAATGGAGCGAAGAATGTAATCATAGCAGCTGCAGAGGCAAAAGTGCGACGTGTGGTGTTCACCTCATCGATTGGTGCGGTATACATGGACCCTAAAAGGAGCATCGATTTGGTGGTTGACGAGTCTTGTTGGAGTGATTTAGAGTATTGCAAGAACACCAAGAATTGGTACTGCTATGGAAAGGCTGTGGCTGAAAAAGCAGCATGGGACACTGCGAAAGAGAAAGGAGTGGACTTGGTTGTGGTGAACCCAGTATTGGTTCTTGGACCACTGCTACAACCAACCATCAATGCCAGCACCATTCACATACTCAAGTACCTCACTGGCTCTGCTAAGACCTATGCAAATGCCACACAGGCTTATGTGCATGTGAGGGATGTGGCATTGGCCCACATACTTGTTTATGAGAAATCTTCTGCTTCTGGTCGATACTTGTGTGCTGAAAGCTCCCTCCACCGTGGAGAACTAGTTGAAATTCTCGCTAAGTATTTCCCTGAGTACCCAGTTCCCACCAAGTGTTCCGATGAAAAGAATCCCAGGGCAAAACCCTACACATTTTCAAACCAGAAGCTGAAGGATTTGGGTTTGGAATTCACTCCAGTGAGTCAGTGTCTGTATGAAACAGTTAAGAGTCTGCAGGAGAAAGGGCACCTTCCTGTTCCTTCAAAGCAGGAAGATTTAACGACAGTGAAGTCATCATGA 1017 0.4828 MPSAESLPPSSQTICVTGAGGFIASWMVKLLLEKGYTVRGTLRNPDDPKNGHLKEFEGASERLTLHKVDLLDVDSVRSVIHGCHGVFHTASPVTDNPEEMVEPAVNGAKNVIIAAAEAKVRRVVFTSSIGAVYMDPKRSIDLVVDESCWSDLEYCKNTKNWYCYGKAVAEKAAWDTAKEKGVDLVVVNPVLVLGPLLQPTINASTIHILKYLTGSAKTYANATQAYVHVRDVALAHILVYEKSSASGRYLCAESSLHRGELVEILAKYFPEYPVPTKCSDEKNPRAKPYTFSNQKLKDLGLEFTPVSQCLYETVKSLQEKGHLPVPSKQEDLTTVKSS 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g04107 338 CDD FR_SDR_e 15 301 - -
Viun5g04107 338 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 314 - -
Viun5g04107 338 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 318 IPR036291 -
Viun5g04107 338 FunFam Cinnamoyl-CoA reductase 1 5 336 - -
Viun5g04107 338 Gene3D - 6 337 - -
Viun5g04107 338 Pfam NAD dependent epimerase/dehydratase family 14 244 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g04107 Viun-Chr5 48341572 48344289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g04107 11 277 Monolignol Biosynthesis Gene Families AT1G80820 74.157 8.33e-143 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g04107 K09753 - gmx:100789070 624.009