Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g04106 ATGGATCGCGGATCCAACGGCACGGGCACGGGTAGTAGCAGCAGCAGGAACATCCTGTTCAACAAGTACGAGATAGGGAAGCTGCTGGGGCAGGGGAACTTCGCCAAGGTGTACCACGGGAGAAACCTGAACACAAACGACAGCGTGGCCATCAAGGTCATAAAAAAGGAGAGGCTTCAGAAGGATAAGCTGGTGAAACAGATAAAGCGCGAGGTCTCCGTCATGCGATTGGTGCGTCACCCCCACATCGTGGAGCTCAAAGAGGTCATGGCCAACAAAGCCAAGATCTTCTTGGTCGTCGAATACGTCAAGGGAGGAGAACTCTTCGCCAAGGTGGCCAAGGGAAAGATGAAGGAAGAAATCGCCCGAAAGTACTTTCAACAGCTCATCAGCGCCGTCGACTTCTGCCACAGTCGTGGCGTCACCCACCGTGATTTGAAGCCGGAGAATCTGCTCCTCGACGAGAACGAAGACCTGAAAGTCTCGGACTTCGGCCTGTCCGCGCTGCCTGACCAGCGCAGATCTGACGGGATGCTCGTGACGCCGTGCGGCACGCCGGCCTACGTGGCGCCGGAGGTTCTGAAAAAGAAGGGCTACGATGGGTCGAAGGCTGATATATGGTCGTGCGGGGTGATCCTCTTCGCGCTTCTTTCTGGGTATTTACCCTTTCAGGGTGAGAATGTTATGAGGATTTATAGCAAGTCTTTCAAAGCTGATTATGCATTCCCGGAGTGGATTTCGCCTGGGGCCAGACGCATGATCTCTAGTTTGCTGGTTGTGGACCCGGAGAAGAGGTATTCCATTCCTGACATCATGAAGGATCCTTGGTTCCAAGTTGGGTTCATGCGCCCCATTGCGTTTTCCATGAAGGAGACGGCTCTGGAGGATAACATCGACTTCAACGGGGACGATGCCGGTGGCAGCGGTGGCAGCGGAAACGTCAGTGGCAGCGAAGACGGTAACAGCAACGGGGAACTGGTCGGGGCGAAGCCGGCTCGTCCGTCTTACAATGCCTTCGAGATAATATCGTCGTTGTCGAACGGGTTTGATCTGAGTAATCTGTTCGAGACAAGGAAGCGGTCGCCGTCGATGTTCATATCGAAGCACTCGGCGTCGACGGTGATGGCGAAACTGGAGGCCTTGGCGAAAAAGCTGAACTTTAGGGTGACCGGGAAGAAGCAGTTCACGGTGAGAATGCAGGGGGCGACGGAGGGGAGAAAGGGGAAGCTGGGGATGACAGTGGAGGTGTTCGAGGTGGCGCCGGAGGTGGCGGTGGTGGAGTTTTCGAAGTCTGCCGGAGACACGCTTGAGTACATAAAGCTGTGTGAGGAAGAAGTGAGGCCTTCGCTGAAAGACATTGTGTGGAGTTGGCAAGGGGACTGCGATTCCCGGCAGTGA 1398 0.5529 MDRGSNGTGTGSSSSRNILFNKYEIGKLLGQGNFAKVYHGRNLNTNDSVAIKVIKKERLQKDKLVKQIKREVSVMRLVRHPHIVELKEVMANKAKIFLVVEYVKGGELFAKVAKGKMKEEIARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSALPDQRRSDGMLVTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILFALLSGYLPFQGENVMRIYSKSFKADYAFPEWISPGARRMISSLLVVDPEKRYSIPDIMKDPWFQVGFMRPIAFSMKETALEDNIDFNGDDAGGSGGSGNVSGSEDGNSNGELVGAKPARPSYNAFEIISSLSNGFDLSNLFETRKRSPSMFISKHSASTVMAKLEALAKKLNFRVTGKKQFTVRMQGATEGRKGKLGMTVEVFEVAPEVAVVEFSKSAGDTLEYIKLCEEEVRPSLKDIVWSWQGDCDSRQ 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g04106 465 CDD CIPK_C 337 451 - -
Viun5g04106 465 Gene3D Transferase(Phosphotransferase) domain 1 14 304 - -
Viun5g04106 465 Gene3D Kinase associated domain 1, KA1 332 456 - -
Viun5g04106 465 ProSiteProfiles Protein kinase domain profile. 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g04106 465 ProSitePatterns Protein kinases ATP-binding region signature. 29 56 IPR017441 GO:0005524
Viun5g04106 465 Pfam NAF domain 335 390 IPR004041 GO:0007165
Viun5g04106 465 FunFam Non-specific serine/threonine protein kinase 332 455 - -
Viun5g04106 465 ProSiteProfiles NAF domain profile. 331 356 IPR018451 GO:0007165
Viun5g04106 465 MobiDBLite consensus disorder prediction 300 327 - -
Viun5g04106 465 SMART serkin_6 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g04106 465 FunFam Non-specific serine/threonine protein kinase 16 316 - -
Viun5g04106 465 Pfam Protein kinase domain 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g04106 465 SUPERFAMILY Protein kinase-like (PK-like) 19 278 IPR011009 -
Viun5g04106 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Viun5g04106 465 FunFam Non-specific serine/threonine protein kinase 14 102 - -
Viun5g04106 465 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 451 - -
Viun5g04106 465 MobiDBLite consensus disorder prediction 308 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g04106 Viun-Chr5 48330038 48332225 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g04106 16 460 CBL-interacting serine-threonine protein kinases AT5G10930 60.626 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Viun5g04106 Pkinase 2.2e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g04106 - - gmx:100804244 770