Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g04075 ATGTCTAACAGAAACGAATATTCTTCATTACCCATTAGCTCCTATGTAGAATTGCAGCGTCAGAACGAGTCATCAAAATCCTTGCGCATTCCTTCTTTTGACGAAACCGAGGTGTATTTGGGATCCAAGATCGAAGACAGCGAGGACGACGAATACATGGAACCGGACATCGATAATTACCCCCTTGTTATGGTGGGGTCCAATAAAGGGTCTGGGATACCAGGGGCTGTTTTCAATTTAACAACAACAGTTATTGGGGCAGGGATCATGGCTCTCCCTGCCACTATGAAAGTTCTAGGATTGGTTTTGGGGATTATTTTGATAATTCTTATGGGGATTTTGTCTGAAATTAGCGTGGAATTGTTGGTGAGGTTTTCTGTTTTGTGTAATGCATCGTCTTATGGGGAGGTTGTTCAGCACGCAATGGGAAAGCCTGTGAGGATTCTGTCTGAAATCTGCATTATTGTGAACAATGCCGGTGTTTTGGTGGTTTATTTGATAATCATGGGGGATGTTATGTCTGGTTCCTCTCACCATATGGGGGTTTTTGATCAGTTAATGGGGAATGGGGCGTGGGATCAAAGGAAGATCGTGGTTTTAGTTGTCATGGTGGTTTTCCTTGCTCCCCTTTGTTCACTTGACAAGATTGATTCATTGAGCTTGACCTCTGCTGCATCCGTGGCTCTTGCTGTTTTGTTTGTGGTTGTTGCTTTTACAGTTGCTTTCATCAAGCTCGTGGAAGGAAAAATCGATTCTCCCAGAATGGCTCCTGATCTAAGCTCCAAAACTGCAATTTTGGATTTTCTTGTTGCGATACCCATCATGACCAATGCATTTGTTTGCCAGTTTAATGTGCAGCCTATATATAATGAGCTTGAACAACGGTCTCCTCAGAAGATGAACACGGTTGGGAGGTACACCACAGTTTTGTGCATCATAGTTTATGCTTCCACTTCCATATCCGGTTACCTGCTCTTTGGGAAAGACACAGAGGCTGATGTGCTGACTAATTTTGATAAGGATCTTGGAATTCGGTATAGCTCTGTCTTGAACTATGTTGTCCGGATTGGCTACATTCTTCATTTGATACTTGTTTTCCCTGTTATTCATTTCTCACTGCGCCAAACAGTGGATGCATTATTGTTTGAAGGATCACCTCCTCTTTCAGAAAGCAAGAAGAGATCTTTGGGTTTGACTGCGGTTCTGTTGGTCCTCATATATATTGGGTCTACTATGATTCCAAACATCTGGACAGCTTTTAAGTTCACTGGGGCAACCACTGCTGTTTCATTGGGTTTTATATTTCCTTCTCTTATTTCATTGAGACTGAGACATCTGGGTGATCTAAGCAACGGGGAATGGGTTTTATCATGGCTGATGTTGGTGTTAGCCGTGACTGTTAGCATAGTAGGAGTTGTTAGCAATGTCTATAGCCTTGAGAGTAACTCTTAG 1452 0.4263 MSNRNEYSSLPISSYVELQRQNESSKSLRIPSFDETEVYLGSKIEDSEDDEYMEPDIDNYPLVMVGSNKGSGIPGAVFNLTTTVIGAGIMALPATMKVLGLVLGIILIILMGILSEISVELLVRFSVLCNASSYGEVVQHAMGKPVRILSEICIIVNNAGVLVVYLIIMGDVMSGSSHHMGVFDQLMGNGAWDQRKIVVLVVMVVFLAPLCSLDKIDSLSLTSAASVALAVLFVVVAFTVAFIKLVEGKIDSPRMAPDLSSKTAILDFLVAIPIMTNAFVCQFNVQPIYNELEQRSPQKMNTVGRYTTVLCIIVYASTSISGYLLFGKDTEADVLTNFDKDLGIRYSSVLNYVVRIGYILHLILVFPVIHFSLRQTVDALLFEGSPPLSESKKRSLGLTAVLLVLIYIGSTMIPNIWTAFKFTGATTAVSLGFIFPSLISLRLRHLGDLSNGEWVLSWLMLVLAVTVSIVGVVSNVYSLESNS 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g04075 483 PANTHER AMINO ACID TRANSPORTER 68 467 - -
Viun5g04075 483 Pfam Transmembrane amino acid transporter protein 71 472 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g04075 Viun-Chr5 48153004 48155174 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g04075 5 483 Amino Acid or Auxin Permease AAAP Family AT1G80510 70.348 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g04075 - - gmx:100791860 763.066