Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g04031 ATGGCGCAAATTCTGCTCCATGGCACTCTCCATGCCACAATCTATGAAGTCGACAACCTCAAAATCGGTGGCGGCAATTTCTTAACCAAGATCGTACATAACATCGAGGAGACTGTTGGTTTTGGAAAAGGTGTCACTAAATTATATGCAACCATTGATCTAGAGAAGGCACGAGTTGGAAGGACCAGAATTCTGGAAAAGGAGGTCAAAAATCCAAGATGGTACGAGTCCTTTCACATTTACTGTGCCCATATGGCATCAAACATCATATTCACAGTGAAAGATGATAATCCTATTGGGGCAACGTTAATTGGAAGAGCATATGTTCCTGTTGAGGAGGTCTTGGACGGTGAAGAAATAGATAGATGGGTTGAAATATTGGACGAGCATAAAAATCCAATTCATGGAAATTCCAAGATCCACGTGAAGCTGCAGTATTTTGACATTTCGAAAGACCGCAACTGGGCTCTTGGCATTAGAAGTCCTAAATTTCCTGGAGTTCCTTATACTTTCTTTTCACAAAGAAGAGGATGCAAGGTTTCTCTGTACCAAGATGCTCATGTACCAGACAACTTTGTCCCTAAAATACCACTCAGTGGAGGCCAGACTTATCAACCTCATAGATGTTGGGAGGATGTTTTTGATGCAATCACCAAAGCACAGCACTTGATATACATCACAGGTTGGTCTGTGTATACTGAGATTTCGTTGGTAAGGGATTCTAGGAGGCCAAAGCCTGGAGGAGACGAAACACTTGGTGAGCTTCTGAAGAAAAAAGCAAGTGAAGGTGTCAGGGTTTTGATGCTAGTCTGGGATGATAGAACTTCTGTTCCTCTGTTAAAAAAAGATGGTTTGATGGCTACTCATGACCAAGAAACAGAGGAGTTCTTCAGGGGAACTGAAGTGCATTGTGTTTTATGCCCTCGCAATCCGGATGACGGTGGAAGCATTGTTCAGGATTTAGAAATTTCTACCATGTTTACTCACCACCAGAAAATCGTAGTCGTGGACAGTGAATTGCCGAGTGGAGAATCTGAGAAGCGAAGGATTGTTAGTTTTGTGGGGGGAATTGATCTCTGCGATGGAAGATACGACTCTCCATTCCATTCTCTTTTCAGAACGCTGGACACAGCACATCACGATGATTTTCATCAGCCTAACTTCGGTGGCGCATCAATACAAAAAGGTGGTCCCAGAGAACCATGGCATGACATCCACTCTCGACTTGAAGGGCCAATTGCTTGGGATGTTTTGTTCAACTTTGAGCAAAGATGGAGGAAGCAAGGTGGAAAGGACTTGCTTGTTCAACTGAGAGACCTTGAAGATGTGATTATTCCTCCATCACCGGTAACTTACCCTGATGATCGAGAGACATGGAACGTTCAGTTATTCAGATCAATTGATGGTGGAGCTGCTTTTGGGTTCCCGGAGACTCCCGAAGAAGCTGCTAGAGTCGGGCTTGTGAGTGGAAAGGATAACATAATAGACCGTAGTATACAAGATGCTTATGTTAATGCCATTAGACGTGCGAAAAATTTCATCTATATTGAGAATCAGTATTTCCTAGGAAGCTGTTACGGTTGGAGTCCTGATGGCATTAAGCCCGAAGACATTGGTGCTTTGCATCTGATCCCGAAGGAGCTTTCGCTTAAGATAGTTAGTAAGATTGAAGCTGGGGAAAGGTTCAGTGTTTATGTTGTTGTCCCAATGTGGCCAGAGGGTGTCCCAGAAAGTGCATCAGTTCAGGCAATATTGGATTGGCAGAGGAGAACAATGGATATGATGTACAAGGATGTTGTTCAGGCACTCCAGGCCAAGGGAATAGAGGAAAATCCTCGGAACTATTTGACATTCTTCTGCCTTGGTAATCGGGAGGTGAAGAAAGAAGGAGAGTACGAGCCTCCAGAAAGACCAGATGCTGATACAGATTATATCAGAGCCCAAGAGGCCCGGCGCTTCATGATATATGTTCATGCCAAGATGATGATAGTTGATGATGAATACATAATTGTTGGATCTGCCAACATAAACCAGAGATCAATGGATGGTGCAAGAGACTCTGAGATTGCAATGGGGGCTTATCAACCCTATCATTTGATCACGAGTGAGCCAGCAAGGGGTCAGATCCATGGTTTCCGCATGTCATTGTGGTATGAGCACCTTGGCATGCTTCATGACTCTTTCCAATTCCCTGAAACCACAGAATGTATCAGAAAAGTGAACCAGATTTCTGACAAGTATTGGGATCTGTATTCAAGTGAGACTCTTGAGCATGACCTTCCCGGCCACTTACTCCGCTATCCCATTGGGGTTTCCAGCGAAGGAACTGTCACTGAGCTTCCAGGATTTGAATTCTTTCCTGACACTAAGGCTCGTGTTCTTGGTGACAAAGTTGACTACCTGCCACCTATCCTTACTACTTAG 2424 0.441 MAQILLHGTLHATIYEVDNLKIGGGNFLTKIVHNIEETVGFGKGVTKLYATIDLEKARVGRTRILEKEVKNPRWYESFHIYCAHMASNIIFTVKDDNPIGATLIGRAYVPVEEVLDGEEIDRWVEILDEHKNPIHGNSKIHVKLQYFDISKDRNWALGIRSPKFPGVPYTFFSQRRGCKVSLYQDAHVPDNFVPKIPLSGGQTYQPHRCWEDVFDAITKAQHLIYITGWSVYTEISLVRDSRRPKPGGDETLGELLKKKASEGVRVLMLVWDDRTSVPLLKKDGLMATHDQETEEFFRGTEVHCVLCPRNPDDGGSIVQDLEISTMFTHHQKIVVVDSELPSGESEKRRIVSFVGGIDLCDGRYDSPFHSLFRTLDTAHHDDFHQPNFGGASIQKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDLLVQLRDLEDVIIPPSPVTYPDDRETWNVQLFRSIDGGAAFGFPETPEEAARVGLVSGKDNIIDRSIQDAYVNAIRRAKNFIYIENQYFLGSCYGWSPDGIKPEDIGALHLIPKELSLKIVSKIEAGERFSVYVVVPMWPEGVPESASVQAILDWQRRTMDMMYKDVVQALQAKGIEENPRNYLTFFCLGNREVKKEGEYEPPERPDADTDYIRAQEARRFMIYVHAKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPYHLITSEPARGQIHGFRMSLWYEHLGMLHDSFQFPETTECIRKVNQISDKYWDLYSSETLEHDLPGHLLRYPIGVSSEGTVTELPGFEFFPDTKARVLGDKVDYLPPILTT 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g04031 807 Pfam C2 domain 8 126 IPR000008 -
Viun5g04031 807 Gene3D Endonuclease Chain A 472 697 - -
Viun5g04031 807 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 653 680 IPR001736 GO:0003824
Viun5g04031 807 Pfam Phospholipase D Active site motif 325 363 IPR001736 GO:0003824
Viun5g04031 807 Pfam Phospholipase D Active site motif 654 680 IPR001736 GO:0003824
Viun5g04031 807 PANTHER PHOSPHOLIPASE D 4 796 IPR015679 -
Viun5g04031 807 Pfam Phospholipase D C terminal 726 796 IPR024632 -
Viun5g04031 807 PIRSF PLD_plant 1 807 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Viun5g04031 807 Gene3D Endonuclease Chain A 199 441 - -
Viun5g04031 807 SUPERFAMILY Phospholipase D/nuclease 151 443 - -
Viun5g04031 807 SUPERFAMILY Phospholipase D/nuclease 440 736 - -
Viun5g04031 807 CDD C2_plant_PLD 2 147 - -
Viun5g04031 807 FunFam Phospholipase D 466 699 - -
Viun5g04031 807 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 325 363 IPR001736 GO:0003824
Viun5g04031 807 SMART pld_4 325 363 IPR001736 GO:0003824
Viun5g04031 807 SMART pld_4 653 680 IPR001736 GO:0003824
Viun5g04031 807 SMART C2_3c 9 123 IPR000008 -
Viun5g04031 807 CDD PLDc_pPLDalpha_2 491 699 - -
Viun5g04031 807 ProSiteProfiles C2 domain profile. 1 124 IPR000008 -
Viun5g04031 807 Gene3D C2 domain 6 156 IPR035892 -
Viun5g04031 807 FunFam Phospholipase D delta 200 443 - -
Viun5g04031 807 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 149 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g04031 Viun-Chr5 47999354 48004969 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g04031 1 807 Phospholipase D Gene Family (Wang group) AT3G15730 81.111 0.0 1406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g04031 K01115 - gmx:100784434 1571.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02737 10 40482496 40486728 Viun5g04031 5 47999354 48004969 ECH
Viun5g04031 5 47999354 48004969 Viun5g04031 5 47999354 48004969 ECH
Viun5g04031 5 47999354 48004969 Viun10g02737 10 40482496 40486728 PCT