Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03994 ATGGCTGTTATTGGATCTCGTGGCAGTCTGCCCATCAACTTTGGTACCCCAGGACTGGTAGGATTGGCCCTCTCATATGCAGCTCCAATTGTGTCCTTATTGGGAAGTTTTTTATCAAGCTTCACTGAAACAGAAAAGGAAATGGTTTCAGTTGAAAGAACTCTTCAATACATGGACATTCCTCAAGAAGAACAAACTGGATGCCTATACTTGAATCCAGATTGGCCAAATCAAGGATTTATCGAATTTGATTGTGTTACTTTGAAGTATATGCCATCTTTGCCAGCTGCACTCTGCAATCTTAGTTTTAGAATTGCTGGAGGAACCCAAGTTGGAATAATTGGAAGAACAGGTGCTGGAATGTCCAGTGTGTTAAATGCTCTTTTCCGTCTTACTCCAATATGTACAGGCTCCATCTCAATTGATGGCGTGGATATTAAAAATATTTCTGTCAGAGAACTACGTACACATTTGGCCATTGTCCCTCAGAGTCCATTTTTGTTCGAAGGATCATTAAGGGATAACCTAGATCCTTTCAAAATGAATGATGACTTAAAAATTTGGAATGCATGTGTGTTTTTGTGTTTTGTGTCTTGTGTCTTGTATTCTGTGTTTTATTGTGTTTTGTGTGTGTTTTTGTGGTTGTGTTGGGAGCGAGAAAAGCAAAGAGTTAAGAGCAGCAAGGAGGGCAGAGAGAGGAACAAGCCGACAACCAAAAGAGATGACACAAGAGCATGGAGCGAGAAACAAGGAGCAGCAAGGAGGCGGAACCAGCGGGCAGCCAAGAGCGAAGAGCATTGA 801 0.4182 MAVIGSRGSLPINFGTPGLVGLALSYAAPIVSLLGSFLSSFTETEKEMVSVERTLQYMDIPQEEQTGCLYLNPDWPNQGFIEFDCVTLKYMPSLPAALCNLSFRIAGGTQVGIIGRTGAGMSSVLNALFRLTPICTGSISIDGVDIKNISVRELRTHLAIVPQSPFLFEGSLRDNLDPFKMNDDLKIWNACVFLCFVSCVLYSVFYCVLCVFLWLCWEREKQRVKSSKEGRERNKPTTKRDDTRAWSEKQGAARRRNQRAAKSEEH 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03994 266 MobiDBLite consensus disorder prediction 224 266 - -
Viun5g03994 266 Pfam ABC transporter 99 200 IPR003439 GO:0005524
Viun5g03994 266 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 16 191 - -
Viun5g03994 266 Coils Coil 252 266 - -
Viun5g03994 266 Gene3D - 68 200 IPR027417 -
Viun5g03994 266 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 196 IPR027417 -
Viun5g03994 266 Gene3D ABC transporter type 1, transmembrane domain 3 65 IPR036640 GO:0005524|GO:0016020
Viun5g03994 266 SUPERFAMILY ABC transporter transmembrane region 16 63 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03994 Viun-Chr5 47776960 47778755 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03994 79 194 Calmodulin-binding Proteins AT2G36910 28.000 1.69e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03994 K05674 - vun:114184797 534.643