Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03973 ATGGAAAGCTTAAAAACACCTTTTAAGGGTGCTAAGAAAGACCTTCGAGGAAGAGCGGTGTACTATAAAGATGATTGGACAACTGGTCTCTACTCAGGAGCTGGAATATTGGCCCCAACTACCTATATTTTCTTTGCTTCTGCTCTTCCAGTCATTGCCTTTGGCGAGCAGCTAAGTAGAGACACAGATGGAAGCTTGAGCACCGTAGAAACGCTGGCTTCTACAGCTATTTGTGGAATCATACACTCAATTTTGGGTGGCCAGCCTCTCTTAATCGTAGGAGTTGCTGAACCCACTATCATTATGTACACTTATTTGTACAACTTTGCCAAAGATAAGGATTCCTTGGGACGAGAACTCTTTTTAGCGTGGGCAGGATGGGTTTGTGTATGGACTGCTCTCTTGCTGTTTCTTCTAGCAATATTCAATGCTGGAAATATCATCAATAGATTTACAAGGATCGCGGGTGAGCTTTTTGGCATGTTGATCACAGTCTTGTTCATTCAAGAGGCTATAAAGGGAATTATAAGTGAGTTTAATGTTCCTAAAGAGGGAGACCCAACATCGGAAAAGTACCATTTTGATTGGCTGTATGCAAATGGATTGATGGGTATTATATTCACCTTTGGCCTTCTCTATACGTCTTTAAAGAGCAGAAGAGCAAGGTCATGGTTATATGGCACAGGGTGGTTTAGGAGTTTCGTTGCAGACTATGGGGTGCCTTTCATGGTGGTGGTGTGGACAGCATTATCATTCATAGTACCAAGTAAAGTGCCTTCTGGAATTCCCAGAAGGCTCACCTCTCCTCTTGTTTGGGAGTCTACATCTTTACATCACTGGACAGTAATCAAAGATATGGGGAAGGTTTCTCCGTCATATATTTTTGCTGCTTTTATTCCCGCCATAATGATAGCGGGGCTTTACTTCTTTGACCATAGTGTTGCTTCCCAGCTGGCACAACAGAAGGAATTCAATCTCAAGAAACCTTCTGCATACCACTATGACATATTGTTGCTAGGACTAACGACTTTGCTTTGTGGATTAATTGGCTTACCCCCTTCAAATGGAGTTCTTCCTCAATCTCCTATGCACACCAAGAGCCTGGCTATTCTCAAGAAACAGATGATCCGAAGAAAGATGGTTAAAAGTGCCAAGGAAAGCATAAATCAGAAAGCTAGCAATTCTGAAATTTATGGGAAGATGCAAGCAGTGTTTATAGAAATGGATAACTGTCCAGATAATCATTCAGTGGTCAAAGAACTAGAGGATTTGAAAGAGGTTGTCTTAAACGGAGAAGACAAAGGACCTGAGAACAAGAGTAACTTTGATCCTGAAAAACACATTGATGCATATTTGCCCGTCAGAGTAAAGGAGCAGAGAGTGAGCAATCTCTTACAATCAATCTTTGTGGGAGCATCAGTCTTTGGCATGCCAGCAATAAAAAAGATACCAACTTCAGTTCTGTGGGGATATTTTGCTTACATGGCCATTGATAGTCTTCCAGGAAATCAATTCTGGGAAAGGATCTTACTCCTTTTTGTAACACCTAGTAGGTGGTACAAGTTGTTGGAGGGGGATCATGCTTCCTTTGTTGAGTCAGTACCTTACAGATACATAGTATTCTTCACTCTCTTCCAATGTGTGTATTTCTTGGTTTGCTTTGGAGTGACATGGATTCCCATAGCTGGAATACTGTTCCCCTTGCCTTTCTTTTTACTAATCACATTGAGGCAGCATATACTCCCCAAGCTGTTCAAGCCTCACCATCTTAGGGAACTAGATGCAGCTGAATATGAAGAAATAGTTGTTGCTCCAGGATTAACTTTCAACAAGTCTTTCAGGGAGGTAGAATCACCCAGAGTTGGATCAGTGGAAATAGTTAATGCAGAAATTTTAGACGAGTTAACTACAAATAGAGGGGAGTTGAAGGTCAGAAATGTCAGCTTTAGTGAGGAAAGAAATCGCCAGGTGCACCCTGATGAAACCGGATCTCCAGACCCAAATTGTTAG 2010 0.4174 MESLKTPFKGAKKDLRGRAVYYKDDWTTGLYSGAGILAPTTYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGIIHSILGGQPLLIVGVAEPTIIMYTYLYNFAKDKDSLGRELFLAWAGWVCVWTALLLFLLAIFNAGNIINRFTRIAGELFGMLITVLFIQEAIKGIISEFNVPKEGDPTSEKYHFDWLYANGLMGIIFTFGLLYTSLKSRRARSWLYGTGWFRSFVADYGVPFMVVVWTALSFIVPSKVPSGIPRRLTSPLVWESTSLHHWTVIKDMGKVSPSYIFAAFIPAIMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILLLGLTTLLCGLIGLPPSNGVLPQSPMHTKSLAILKKQMIRRKMVKSAKESINQKASNSEIYGKMQAVFIEMDNCPDNHSVVKELEDLKEVVLNGEDKGPENKSNFDPEKHIDAYLPVRVKEQRVSNLLQSIFVGASVFGMPAIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVTPSRWYKLLEGDHASFVESVPYRYIVFFTLFQCVYFLVCFGVTWIPIAGILFPLPFFLLITLRQHILPKLFKPHHLRELDAAEYEEIVVAPGLTFNKSFREVESPRVGSVEIVNAEILDELTTNRGELKVRNVSFSEERNRQVHPDETGSPDPNC 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03973 669 Gene3D Helical hairpin bin 18 60 - -
Viun5g03973 669 PANTHER ANION EXCHANGE PROTEIN 5 602 IPR003020 GO:0005452|GO:0006820|GO:0016020
Viun5g03973 669 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
Viun5g03973 669 Pfam HCO3- transporter family 200 374 IPR011531 GO:0006820|GO:0016020
Viun5g03973 669 Pfam HCO3- transporter family 454 544 IPR011531 GO:0006820|GO:0016020
Viun5g03973 669 MobiDBLite consensus disorder prediction 650 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03973 Viun-Chr5 47644464 47648892 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03973 1 661 Antiporters AT1G74810 69.069 0.0 958
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03973 K24194 - gmx:100811184 1206.43