Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03930 ATGCCCAAGAAAATTCGAGATTACCTCTTCAAAATCAAAAGTCCACGCCCTCAAATCCGATTACCCTCCAAGAACTGGATTCTATCTGGTTGCAAACATCCTAGGACACCTTCCTTTGCCTTGTACAGTGTTAGAAACGAACCTTCTCGTCGTCCTCGTCACCATCATCATCAACAACAACACGTTGTTCGTGAGAGCAGCAACAATCACCACCGCAAGGACGATGCAGCCACCTTAGCAGACGTTGACCGTTTCCTCTTAGAGAATTTCAAGTCTTTGTACCTCAAAGACGACGATGAAACCTTAAACACCAAAAGGGTCTTCGAAGGTGACGACGGAGACCACGAAGCGGTAGAAACAACATCGCCACGTGATGTTCGTGGGTCGACCCGGTTCTTCGTGAAGCCTGGGTTCTCTGGGTCGCTGGTGGAGGACGCTCTCACAAACACCACCATTAATACAGCAACCAGTGACGAAGTAGGATCGGTGTCAACTGTGTCAACCCTCTACGATGTTTCGTCTTCCGGTTCTTACGAGAAGGAGGGTGCGGATCACGCGCTTCCCGATGATAGCATCGCTCTCTTGACGCACTCCACCAGCCCTTACGACGATTTCAGACGTTCCATGCAAGAAATGGTGAACAACCACGAAGGAGTGGTTGATTGGGATTTCATGGAGGAGCTCTTGTTTTCTTACCTTAATCTCAACCACAAAAAGTCGCATAAGTTCATCCTTGGTGCTTTCGTCGATCTCATCACCGTCATGCGTCGGAGTAATTCCGAACCACCTTCCGACAAGCCGCGTAGCGTTCGAACCGTTAGGAGTGTGACCAAAAACGTCACGTTAGGATTTGGGTCCTCCCTGTAA 867 0.4925 MPKKIRDYLFKIKSPRPQIRLPSKNWILSGCKHPRTPSFALYSVRNEPSRRPRHHHHQQQHVVRESSNNHHRKDDAATLADVDRFLLENFKSLYLKDDDETLNTKRVFEGDDGDHEAVETTSPRDVRGSTRFFVKPGFSGSLVEDALTNTTINTATSDEVGSVSTVSTLYDVSSSGSYEKEGADHALPDDSIALLTHSTSPYDDFRRSMQEMVNNHEGVVDWDFMEELLFSYLNLNHKKSHKFILGAFVDLITVMRRSNSEPPSDKPRSVRTVRSVTKNVTLGFGSSL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03930 288 ProSiteProfiles OVATE domain profile. 194 254 IPR006458 -
Viun5g03930 288 NCBIfam uncharacterized plant-specific domain TIGR01568 192 254 IPR006458 -
Viun5g03930 288 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 60 255 IPR038933 GO:0045892
Viun5g03930 288 MobiDBLite consensus disorder prediction 47 74 - -
Viun5g03930 288 Pfam Transcriptional repressor, ovate 198 253 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03930 Viun-Chr5 47361724 47362945 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Viun5g03930 Ovate 2.9e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03930 - - vum:124828607 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03930 5 47361724 47362945 Viun5g03930 5 47361724 47362945 ECH
Viun5g03930 5 47361724 47362945 Viun10g02683 10 40129926 40130932 PCT