Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03919 ATGTCTCCTGAGTATGCTTTAAATGGTATTGTATCAACAAGAATGGATGTTTTTAGTTTCGGAGTATTGATGCTTGAGATTATCAGTGGTAAAAGGAATTCTAGTAATTTTGATTCGGACCATCCCATCAATCTCATAGGACATGCATGGCAGACGTGGAATAAGGGTGAAGCTTTAGAATTAATAGACCCTGTTTTGAAGGGATCATGTGTTGATAACGAAGTGTTAAGATGCATTAATGTCAGCCTTTCATGTGTGCAAGATCAAGCGGATGATAGACCAACTATGTCAAATGTTGTATCTTTCCTATCAAGTGAGTCTATTCTGCTAGCTGAACCGAAGCAACCAACATTCTTCACTAATACTGCAGAGAAAAATCCTAGAAGTCCTATTGTTGGTGGAAGAAATGATTCTCTAAATACCGTAACAATTTCGACAATGTGTGGTAGATAA 453 0.3731 MSPEYALNGIVSTRMDVFSFGVLMLEIISGKRNSSNFDSDHPINLIGHAWQTWNKGEALELIDPVLKGSCVDNEVLRCINVSLSCVQDQADDRPTMSNVVSFLSSESILLAEPKQPTFFTNTAEKNPRSPIVGGRNDSLNTVTISTMCGR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03919 150 Pfam Protein tyrosine and serine/threonine kinase 1 103 IPR001245 GO:0004672|GO:0006468
Viun5g03919 150 Gene3D Transferase(Phosphotransferase) domain 1 1 119 - -
Viun5g03919 150 SUPERFAMILY Protein kinase-like (PK-like) 1 128 IPR011009 -
Viun5g03919 150 ProSiteProfiles Protein kinase domain profile. 1 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03919 150 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03919 Viun-Chr5 47319128 47319669 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03919 1 124 Receptor kinase-like Gene Family AT3G45860 49.206 5.54e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun5g03919 PK_Tyr_Ser-Thr 5e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03919 - - vun:114184796 304.679