Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03918 ATGGATAGTTCTTTCTTGTTATCTTTTGTGGTAGGATTTAGTATTCATCCTATTCTTCTGATGAGTTTATTTTTGTCAAATGTAGCCAATAAGAGGAAATCATGGACAGGGAGTGTGATTGGTGGAGCTCTACTAATACTTGTATCATCCTTCGTGTTCTATTTATTGTGGAGGAAACGCAGAATAGCGGAAGAAAGATTGAAGCAAAAGAAGATATTATTTGAGATCGAAGGAATAACAAACCCTTCTTCCCTTTTAGACAACAGACGCTCAAAATTTAGTAAAATTGAAACCACAAATCATGGGATGCGTGTGTTCAGCTTTGAAAGCATTGAATTAGCAACTGATAATTTCTCTTCAGCGAATAAGTTGGGTGAAGGTGGCTTTGGACCTGTCTACAAGGGAAAACTTATTGATGGTCTAGAAATAGCAATAAAGAGACTTTCTAGAAGTTCGACACAAGGATTAGCTGAGTTTAAGAACGAGGTTAAATTAATTGCGAAATTCAACCACACTAACTTGGTCAAGCTCTACGGTTTCTGCATTGAAAAAGAAGAAAGGATGTTGATCTACGAATACATGCCCAACAAAAGTTTGGACAGTTACCTTTTTGATCCCACCAACACTTTGTTGGATTGGAAGAGAAGATTTTCCATCGTTCAAGGAATTGCACAAGGACTTGTCTATCTTCATACGTATTCAAGACTAACAGTAATTCACAGAGATTTAAAGCCAAGTAACATTTTATTGGATTATGAATTGAATCCGAAGATATCAGATTTTGGTTTGGCAAGGATATCTGAGTTGAATGAACCCAAAAAAAAGACAAACAAGGTTGTTGGAACTTAG 849 0.3616 MDSSFLLSFVVGFSIHPILLMSLFLSNVANKRKSWTGSVIGGALLILVSSFVFYLLWRKRRIAEERLKQKKILFEIEGITNPSSLLDNRRSKFSKIETTNHGMRVFSFESIELATDNFSSANKLGEGGFGPVYKGKLIDGLEIAIKRLSRSSTQGLAEFKNEVKLIAKFNHTNLVKLYGFCIEKEERMLIYEYMPNKSLDSYLFDPTNTLLDWKRRFSIVQGIAQGLVYLHTYSRLTVIHRDLKPSNILLDYELNPKISDFGLARISELNEPKKKTNKVVGT 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03918 282 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 30 282 - -
Viun5g03918 282 SMART serkin_6 118 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03918 282 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Viun5g03918 282 ProSiteProfiles Protein kinase domain profile. 118 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03918 282 Pfam Protein kinase domain 120 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03918 282 SUPERFAMILY Protein kinase-like (PK-like) 91 282 IPR011009 -
Viun5g03918 282 Gene3D Phosphorylase Kinase; domain 1 80 193 - -
Viun5g03918 282 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 83 193 - -
Viun5g03918 282 Gene3D Transferase(Phosphotransferase) domain 1 194 282 - -
Viun5g03918 282 FunFam Os07g0541700 protein 194 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03918 Viun-Chr5 47319103 47321001 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03918 98 282 Receptor kinase-like Gene Family AT4G11530 57.527 2.13e-72 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun5g03918 Pkinase 2.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03918 - - vun:114184108 552.362