Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03891 ATGGCGCTGTCATCTATGTTCTATACCAACGTTGTTGTCGTGTCTCGTAAATGCTACAAAACACTGGATTATCCGGAGAAGAAGAGAAACTTGGTTTCATCGATTTTCAGCCGAAAACGTTGGGAAGCTGGGATGTCCAAATTCTTAACACTGCTTCTTATGGAGTTTCTAATAACTTTGATGAAACAAAGCAAGAAAATTCTCAAAGGGGCACTTTGTACGAACATGGGCGTCAAGAATTTCAGCCCGCTGACTCATCTTGGTCACACATGGTGCCTGTTTCTTCTCCCGGCTCTTCTTCTGTCACTACCACCATCAGTGTGTAATAGCACAGCAACACTTAGTGTTTGTAAGAAAGCTAGGGTTCAGTCATCTTCGAGTCAAGCACCTCTCAAGGTTCGGAAGGAGAAGCTAAGTGATAGAATAACAACACTTCACCAACTAGTTTCCCCGTTTGGAAAGACTGACACAGCTTCTGTCTTGTTGGAAGCCATTGGATATATAAGGTTTCTGCAGGGTCAAATTGAGGCACTAAGTTCTCCTTACTTGGACGATGCATCAAAAAACACGACGAATCAACAGTCTGTTGATGGAGAAAGAACCTGTGTTTTTCCAGAGGATCCGGGTCTGCTGTTGAAAGAGAATAATGGCCTGAAAAGAAAAGGAGGTACAAACCAGGAAGCAGAAGATAAAGCAAAGGAGTTGAAGAGTAGAGGGTTATGCTTGGTGCCGGTGTCTTGTACCCAACATGTTGTGACCCAAAATGAGTGGCACGGAAGAGGATTTTAA 789 0.4347 MALSSMFYTNVVVVSRKCYKTLDYPEKKRNLVSSIFSRKRWEAGMSKFLTLLLMEFLITLMKQSKKILKGALCTNMGVKNFSPLTHLGHTWCLFLLPALLLSLPPSVCNSTATLSVCKKARVQSSSSQAPLKVRKEKLSDRITTLHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLDDASKNTTNQQSVDGERTCVFPEDPGLLLKENNGLKRKGGTNQEAEDKAKELKSRGLCLVPVSCTQHVVTQNEWHGRGF 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03891 262 Gene3D - 129 195 IPR036638 GO:0046983
Viun5g03891 262 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 117 250 - -
Viun5g03891 262 CDD bHLH_AtbHLH_like 132 179 IPR045239 -
Viun5g03891 262 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 132 182 IPR036638 GO:0046983
Viun5g03891 262 Coils Coil 218 238 - -
Viun5g03891 262 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 122 171 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03891 Viun-Chr5 47186935 47189468 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03891 106 209 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 67.290 3.25e-37 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03891 - - vun:114183597 313.153