Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03866 ATGGCTGCCACCAACACTTCTGTTCACGCTTCCATTCATTACCACGTTGGTGGTAGCCTCGGTTGGCACCAACCTGACCCCAACAATACTGAGTTTTATAGCCAATGGGCTCAGAGGAACAGGTTTCAAGTTGGTGATGCTCTCGTTTTTGAGTACCAGAATGACTCGGTTCTCAGTGTGGAGAAATTGGATTACATGAATTGTGATGCAAGTAACCCTATCACAGCTTTTGACAATGGTAAGAGCACTTTTAACCTTGACAGGCCCGGGGACTTCTACTTCATCAGTGGAAACAATGAACACTGCAAGAATGGGCAAAGATTAGACGTGGATGTGATTCATGAACACCGATTTTCATCTCCACCACCCATTTCTCTTCCGCCGCAAGGGCTTCCACCAATGGCCCCTCCACCTTCTGATCAAGGTTTTGAGGATTCAACATCAGCCTCAGTGATGCTTACTGCTACTTCTATGTCTGTTTTGGTGATCACGTTTGTTATTGTGGTGCTGTTAGCACCCTGA 522 0.4636 MAATNTSVHASIHYHVGGSLGWHQPDPNNTEFYSQWAQRNRFQVGDALVFEYQNDSVLSVEKLDYMNCDASNPITAFDNGKSTFNLDRPGDFYFISGNNEHCKNGQRLDVDVIHEHRFSSPPPISLPPQGLPPMAPPPSDQGFEDSTSASVMLTATSMSVLVITFVIVVLLAP 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03866 173 FunFam Early nodulin-like protein 1 11 117 - -
Viun5g03866 173 Gene3D - 12 121 IPR008972 -
Viun5g03866 173 CDD OsENODL1_like 14 113 IPR041846 -
Viun5g03866 173 MobiDBLite consensus disorder prediction 121 139 - -
Viun5g03866 173 SUPERFAMILY Cupredoxins 12 113 IPR008972 -
Viun5g03866 173 ProSiteProfiles Phytocyanin domain profile. 12 114 IPR003245 GO:0009055
Viun5g03866 173 PANTHER BLUE COPPER PROTEIN 12 146 IPR039391 GO:0009055
Viun5g03866 173 Pfam Plastocyanin-like domain 29 106 IPR003245 GO:0009055
Viun5g03866 173 MobiDBLite consensus disorder prediction 119 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03866 Viun-Chr5 47099193 47099829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03866 14 125 Phytocyanin Superfamily AT1G79800 52.991 9.21e-41 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03866 - - gmx:100783893 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03866 5 47099193 47099829 Viun5g03866 5 47099193 47099829 ECH