Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03835 ATGAATATCAATAGCACAAAGGGACTTCTTGCACTCTTTGCGTTTGTGTTCTTTGCATTGGGTAATGCACAAAATACCCTTGTGCCAGCAATCATAACATTTGGTGACTCAGCCGTGGATGTTGGGAATAATGATTATTTGCCTACCATTTTCAAGGCAAATTACCTTCCTTATGGAAGGGACTTTTTCAACCATCAACCCACTGGGAGGTTCTGCAATGGGAAACTAGCCACTGATATTACTGCTGAAACGCTGGGTTTTAAGAGTTTCGCACCTGCATATCTTAGCCCTCAGGCTTCAGGGAAGAATCTTCTCATTGGAGCAAACTTTGCTTCAGCAGCCTCTGGTTATGATGAAAAAGCTGCTATTTTGAACCATGCGATTCCATTGTCTCAACAGTTAAAGTATTTCAAGGAATATCAAGGCAAGTTGGCCAAGGTTGCTGGTAGTAAAAAAGCAGCGTTGATTATTAAGGATGCGCTGTACATATTGAGTGCTGGCAGTAGTGATTTTGTGCAAAACTATTACGTCAATCCTATAATAAGCAAAGCCTTAACTCCTGATCAGTATTCTGCATACCTTGTGGGTGCATTTTCAATCTTTGTTAAGGACTTGTATAAATTGGGAGCTAGGAAAGTTGGAGTGACTTCACTCCCACCTCTAGGGTGCCTACCTGCTGCAAGAACATTGTTTGGTTTCCACGAGAATGGTTGTGTCTCGAGGATCAACAATGATGCCCTAGGATTTAACAACAAAATCAAAACAGCTGCAGCAAATCTCCAGAAGCAGCTTCCTGGTCTTAAGATTGTTGTGTTTGATATTTTCAAACCTCTTTATGAGCTTGTTCAGTCCCCTTTAAAATCTGGTTTTGCCGAGGCAAGGAAAGGTTGCTGTGGTACTGGAATAGTGGAGACAACATCTTTATTGTGCAATCCAAAATCACCAGGAACTTGTTCTAATGCAACCCAATATGTGTTTTGGGATAGCGTCCATCCTTCACAAGCTGCTAACCAAGTTCTAGCCGATGCATTGATTCTACAAGGCATAGCCCTTATCACTTAA 1062 0.4162 MNINSTKGLLALFAFVFFALGNAQNTLVPAIITFGDSAVDVGNNDYLPTIFKANYLPYGRDFFNHQPTGRFCNGKLATDITAETLGFKSFAPAYLSPQASGKNLLIGANFASAASGYDEKAAILNHAIPLSQQLKYFKEYQGKLAKVAGSKKAALIIKDALYILSAGSSDFVQNYYVNPIISKALTPDQYSAYLVGAFSIFVKDLYKLGARKVGVTSLPPLGCLPAARTLFGFHENGCVSRINNDALGFNNKIKTAAANLQKQLPGLKIVVFDIFKPLYELVQSPLKSGFAEARKGCCGTGIVETTSLLCNPKSPGTCSNATQYVFWDSVHPSQAANQVLADALILQGIALIT 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03835 353 Pfam GDSL-like Lipase/Acylhydrolase 31 343 IPR001087 GO:0016788
Viun5g03835 353 SUPERFAMILY SGNH hydrolase 121 344 - -
Viun5g03835 353 Gene3D SGNH hydrolase 20 348 IPR036514 -
Viun5g03835 353 FunFam GDSL esterase/lipase APG 20 349 - -
Viun5g03835 353 CDD SGNH_plant_lipase_like 29 345 IPR035669 -
Viun5g03835 353 PANTHER GDSL ESTERASE/LIPASE EXL3 14 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03835 Viun-Chr5 46862250 46863814 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03835 9 345 Pollen Coat Proteome AT1G75910 34.412 1.32e-61 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03835 - - gmx:100795716 644.425