Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03832 ATGGATGGAAAATGGAGATGCCATTGGGCTTGGAGCTTCACCTTATGGTGTGTCCTTGCATATACCATTTCAGAATTTTCAGGAATGTCCATAGTTCTGGCCACAGAGGAGAACTCTATGCATCACAAACAAGGAAGAAGGAAACTAGATGATGTCAGTGGTTCTATTTCCATTGACTGTGGGATAGCAGAAGAAGTGGCTTACACTGATGAGAAAACTCAGATTCATTACACTTCAGATGCACAGTTTATTGGCACTGGAACAAGCAAAAACATATCCCTCATGCTCAGTTCTGAAATACCCCAAAGAGTTTTCACTACTGTGAGAAGCTTCCCTGAGGATAAAAGAAACTGCTACACACTACGACACCCAGAAGGCGGAAATACTATTTACTTGATAAGAGCTTCTTTTATGTATGGAAACTATGATGACTTGAACAAGCTGCCACAGTTTGATCTCTATGTTGGGGTCAATTTTTGGGACTCTGTGATGTTTGAAAATGCCACTCATGTTGTAATCAAGGAAATTTTACATGTGCCATCCTTGGATGAATTATATATTTGTTTATTGAATACTGATATGGGAACTCCTTTTATATCAGCACTGGAGGTGAGGCATTTTGATCATTCCAGTTACAGAACAAACTCTGAACTCTTATCCCTATATAGACGTTTTGACATTGGATCAATAACCAATGAAATAGTGAGATTTAACGAAGATACTTATGATCGAATGTGGTATCCTTACAACTTACCAGATTCTACACCACTCAGTACTTCCCAACCCATTGACTCCTTGAACCATACTGCTTATCACCTTCCAGCAGCAGTAATGAAAACTGCTTTGAGACCAACAAATGAAAATGATTCTCTGGAATTTGATTTTGACACCGGAAATCCTACTTCAGATTCATATGTTTACATGCACTTTGCTGAAATTGAAAAGCTTAAGGACAACGAAAGCAGGGTATTCGACATTACACTGAATGGAAAAGTTTTGTCTGAATCTGTGACTCCCAAGCATTTGCTGTCAACTACGGTAGAAAGTAAACAGGCCATTAGGGGAAGCAAGCTCAAGTTTTCTATGTACAAGAAACCAAATTCCACCCATCCTCCCATTCTAAATGCGATGGAGATTTATGTTGTTAAAGAATTCTTGCAAAAACCTACTGGTCAAGAAGATGTTAAGGCTATCATGTCCATCAAATCATATTACAAGTTGATGTCGTCGTTGGGTAAATCTTGGCAAGGAGACCCTTGTGCACCGTTGAAATACTCTTGGAATGGTATAAACTGCAGCAATAATGGATATGAACCACCAACAATAACTGCGTTAAACCTAGCGTCCAGTGGATTAGATGGCCCCATAATTGATTCTTTTTTGGAACTCAAATTCTTGGAATTCTTGGATTTATCAAATAATAGCTTAACAGGATCACTGCCTGATTTTTCAAAGCTGCAATACTTAAAAACTCTCAATTTATCAGGGAACAGACTCTCGGGTGAAATTCCTCCACTTCTCATGGAAAGATCAAATAATGGTTCCCTTATGTTGAGTGTGGATCCGGATCTCTGCCCAATAGGCCCATGTGAAGAGAAGAAAAACAATATTGTTCCACTTGTAGCAGGCATTCTTTCAGCTGTAGTCTTTCTCATTGTATTGGGTATTGTGCTGACTATCATTTGGAGGAGACGCAACAAAGAAACAGCCTCAAATCAAGCTGTGAGATCAAACGAAGAAGTTGTGCTGAAGACAAACAACAAACAGTTCTCGTACTCTCAGATAATGACTATAACCAATAACTTTGACAAAACAATTGGGAAGGGAGGGTATGGAATTGTTTATCTTGGTTACTTACAGGATGGCACACAAGCTGCTGTCAAAATGCTCTCTTCTAAATCTCCTCAAGGATCTCAGCAGTTTCAGACAGAGGCTCAACTCTTAATGCGTGTGCATCATAAGAACTTAGCTTCCTTTCTTGGATACTGTAATGAAGTTGGACGCACAGCCATCATTTATGAATACATGACTAATGGTAACTTGGAAGAGTATCTTTCAGTAGATCCTAGGAGAGAACCATTGAGTTGGAGACAGAGGATTCAGATAGCAGTTGATGCTGCTCAAGGTATCGAGTACTTGCATCACGGTTGCAAGCCACCAATAGTCCATAGAGACATAAAGACTGCAAACATTTTACTGAATGAGAAAATGCAAGCAAAAGTAGCTGATTTTGGTTTCTCAAAATTTTTCTCCGCTGAAAATGAAAGTCACGTATCAACTGTAGTTATTGGCACGTTTGGATATCTTGATCCAGATTTGCTTTTACAGATACTACATATCCAGCAGGCTGACTGA 2355 0.3924 MDGKWRCHWAWSFTLWCVLAYTISEFSGMSIVLATEENSMHHKQGRRKLDDVSGSISIDCGIAEEVAYTDEKTQIHYTSDAQFIGTGTSKNISLMLSSEIPQRVFTTVRSFPEDKRNCYTLRHPEGGNTIYLIRASFMYGNYDDLNKLPQFDLYVGVNFWDSVMFENATHVVIKEILHVPSLDELYICLLNTDMGTPFISALEVRHFDHSSYRTNSELLSLYRRFDIGSITNEIVRFNEDTYDRMWYPYNLPDSTPLSTSQPIDSLNHTAYHLPAAVMKTALRPTNENDSLEFDFDTGNPTSDSYVYMHFAEIEKLKDNESRVFDITLNGKVLSESVTPKHLLSTTVESKQAIRGSKLKFSMYKKPNSTHPPILNAMEIYVVKEFLQKPTGQEDVKAIMSIKSYYKLMSSLGKSWQGDPCAPLKYSWNGINCSNNGYEPPTITALNLASSGLDGPIIDSFLELKFLEFLDLSNNSLTGSLPDFSKLQYLKTLNLSGNRLSGEIPPLLMERSNNGSLMLSVDPDLCPIGPCEEKKNNIVPLVAGILSAVVFLIVLGIVLTIIWRRRNKETASNQAVRSNEEVVLKTNNKQFSYSQIMTITNNFDKTIGKGGYGIVYLGYLQDGTQAAVKMLSSKSPQGSQQFQTEAQLLMRVHHKNLASFLGYCNEVGRTAIIYEYMTNGNLEEYLSVDPRREPLSWRQRIQIAVDAAQGIEYLHHGCKPPIVHRDIKTANILLNEKMQAKVADFGFSKFFSAENESHVSTVVIGTFGYLDPDLLLQILHIQQAD 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03832 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 721 733 IPR008271 GO:0004672|GO:0006468
Viun5g03832 784 ProSiteProfiles Leucine-rich repeat profile. 488 510 IPR001611 GO:0005515
Viun5g03832 784 ProSiteProfiles Leucine-rich repeat profile. 465 487 IPR001611 GO:0005515
Viun5g03832 784 Pfam Protein tyrosine and serine/threonine kinase 602 761 IPR001245 GO:0004672|GO:0006468
Viun5g03832 784 PRINTS Leucine-rich repeat signature 486 499 - -
Viun5g03832 784 PRINTS Leucine-rich repeat signature 466 479 - -
Viun5g03832 784 Gene3D Ribonuclease Inhibitor 391 539 IPR032675 -
Viun5g03832 784 Gene3D Transferase(Phosphotransferase) domain 1 676 784 - -
Viun5g03832 784 SUPERFAMILY L domain-like 397 510 - -
Viun5g03832 784 Pfam Leucine Rich repeats (2 copies) 466 505 IPR025875 -
Viun5g03832 784 PANTHER OS07G0107800 PROTEIN-RELATED 56 773 - -
Viun5g03832 784 SUPERFAMILY Protein kinase-like (PK-like) 580 777 IPR011009 -
Viun5g03832 784 Gene3D - 224 382 - -
Viun5g03832 784 FunFam Leucine-rich repeat receptor-like protein kinase 576 675 - -
Viun5g03832 784 ProSiteProfiles Protein kinase domain profile. 600 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03832 784 Pfam Malectin-like domain 58 381 IPR024788 -
Viun5g03832 784 FunFam Leucine-rich repeat receptor-like kinase 393 523 - -
Viun5g03832 784 FunFam Os07g0541700 protein 676 765 - -
Viun5g03832 784 SMART serkin_6 600 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03832 784 Gene3D Phosphorylase Kinase; domain 1 582 675 - -
Viun5g03832 784 ProSitePatterns Protein kinases ATP-binding region signature. 606 628 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03832 Viun-Chr5 46843075 46847720 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03832 48 772 Receptor kinase-like Gene Family AT2G19210 46.803 0.0 673
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Viun5g03832 Malectin_like 3e-108 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03832 - - gmx:100791717 1307.35