Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03831 ATGTGGACTGTGAGAAGCTTCCCGGAAGGAAAAAGGAACTGCTACAAAATAAACATCACAAGAGACTCTAAGTATCTTATCCGGACTAGTTATTTGTACGGAAATTATGATGGGCTGAATAAGACACCACAGTTTGATACTCATCTCGGGGCTAACTGGTGGCATACTGTGACTCTGTCCAATGCATCCACTCCTCAAGGCAAAGAGATCATACATGTAACGTCACAAGATTATGTACAAATCTGTCTGGTTAACACGGGCTATGGAACACCATTTATATCTGCCATAGAATTTAGAACTTTGCCAAATAATATTTATGTCACTCAATTTGGCTCATTGGAAACTTACTACCGGTGGGATTTAGGTTCAAACCAAAGCTACAGGTACCAATATGATGATTTAGATCGTTTCTGGTATGACAAATTTGGTGACAGCAAAGATTGGTCACAATTAAGTGTTTCTATTCCTGCCGAGTCATTAGGGCAGAATGATTACAAACCGCCCGCAATTGTGATGAGCACCGCAGTTACACCAGCAAATGCTAGTGCTCCACTGCTAATAAGTTGGGAGCCAGAAAATGAAACTGACCAATTCTATGTCTACATGCACTTCACGGAATTGTTCACCACGAATCAGACAAGACGATTCAACATCATGAGGAACGCTGAATCATGGTTTTCAGATTGTTCTCCAGAGTACCGACGTGTGCTTACTATATATACGCAGTCAGCCATCAGCGGAAAAGCAATTAACTTTTCACTGGAAAGGACCGAAAGTTCTACCCTGCCTCCCATCATTAGTGCCGTTGAAATTTACAGAGTACAAGAATTTCATCAATCTGATACACTCCAAGGAGATGTTGATGCCATTACTACCATAAAGTCAGTTTATGGAGTGAAAAGAGATTGGCAAGGTGATCCATGCGCGCCTGCAACCTACTTGTGGAATGGTCTCAACTGTACTTACGGTGACAATGAGTTACCAAGAATCACAACTTTGAATTTATCGTCAAGTGGATTATCAGGAAAGATTGACCCTTCAATCTCAAAGCTCACCATGTTGGAGAAGCTGGACTTATCGAATAATAGCTTAAACGATGAGGTTCCTGATTTTTTGGCTGAGTTACAACACTTAAAGATCTTAAACTTGGAGAAGAATAACCTCTCCGGTTCAATTCCGTCGGCACTTGTTGAAAAATCTAAGAAAGGTTCACTAACCCTAAGTTTGGGTCAAAATCCATATATCTGTGAACATGGTCAATGCATCGAGAACAGACATAACATTGTTATGCCCTTGGTAGCATCAATATGCGGGGTTTTGATCCTTCTGGTGGCTGTGGCAGCTGTATTGTGGATCCTTAAGAGGAGAAAATCAAAAGCTTGGATGGTAGAAAAGGATCAAAGTGAGATCTCCCTGCAGTACACAGAACAAGATGACTCATTAAAGAAGTTAAAAAAAAAAAAATATTCATACTCTGATATCATTCAAATCACCAACAATTTCACTACAATTGTTGGTAAAGGAGGATTTGGAACAGTTTATCTGGGCTATATCGAAGACGCTCCAGTTGCTGTCAAAATGCTTTCCCCTTCATCATTTCGTGGTTATGAGCAATTTCAAGCAGAGGTTAAACTTCTAATAAGAGTTCATCATAAAAATCTGACTTCCCTTATTGGTTACTGTAGTGAAGGAACCAATAAGAGTCTCATATACGAGTATATGGCTAATGGAAACTTAGAGGAACATCTCTCTGGCAAACACAGTAAATCAAAACTCTTGAGCTGGGAAGACAGACTGCATATAGCAGTGGACGCAGCCTTGGGATTGGAGTATCTGCAAAATGGTTGCAAGCCACCTATAATACACAGGGACGTAAAATCTTCAAACATCTTGTTGACTGAAAACTTCCAAGCAAAATTATCAGATTTTGGTCTATCCAAAATTATCCCAGCTGATGGGAGATCACATGTGTCAACTGTTATAGCTGGTACTCCTGGTTATCTGGACCCTGATTATTACACATCCAATAGATTAACAGAGAAAAGTGATGTTTATAGCTTCGGAGTGGTTCTTTTGGAAATAATCACAGGCCAGCAGGTAATAGCAAGGAATGAAGAAAAGAGTCACATAATTGATTGGGTTAGATCCCTGGTTGCATTAGGGGATATCAGGGCCATTGTTGACTCAAGGTTTGAAGGAGATTTTGACATTAACTCAGCCTGGAAAGCCGTGGAAATAGCAATAGCTTGTGTTTCTCTAAGTCCCAACGAAAGGCCAATTATGAGTGTGATAGTGTCTGACCTAAAGGAGACTTTAGCAACCGAAATAGCTCGAACAAAATATAACAGTGGTGCAAATTCATTTGAACCGCTCAATGTGAATCTGAGCACCCAACTCATTCCTCATGCTAGGTAA 2415 0.4025 MWTVRSFPEGKRNCYKINITRDSKYLIRTSYLYGNYDGLNKTPQFDTHLGANWWHTVTLSNASTPQGKEIIHVTSQDYVQICLVNTGYGTPFISAIEFRTLPNNIYVTQFGSLETYYRWDLGSNQSYRYQYDDLDRFWYDKFGDSKDWSQLSVSIPAESLGQNDYKPPAIVMSTAVTPANASAPLLISWEPENETDQFYVYMHFTELFTTNQTRRFNIMRNAESWFSDCSPEYRRVLTIYTQSAISGKAINFSLERTESSTLPPIISAVEIYRVQEFHQSDTLQGDVDAITTIKSVYGVKRDWQGDPCAPATYLWNGLNCTYGDNELPRITTLNLSSSGLSGKIDPSISKLTMLEKLDLSNNSLNDEVPDFLAELQHLKILNLEKNNLSGSIPSALVEKSKKGSLTLSLGQNPYICEHGQCIENRHNIVMPLVASICGVLILLVAVAAVLWILKRRKSKAWMVEKDQSEISLQYTEQDDSLKKLKKKKYSYSDIIQITNNFTTIVGKGGFGTVYLGYIEDAPVAVKMLSPSSFRGYEQFQAEVKLLIRVHHKNLTSLIGYCSEGTNKSLIYEYMANGNLEEHLSGKHSKSKLLSWEDRLHIAVDAALGLEYLQNGCKPPIIHRDVKSSNILLTENFQAKLSDFGLSKIIPADGRSHVSTVIAGTPGYLDPDYYTSNRLTEKSDVYSFGVVLLEIITGQQVIARNEEKSHIIDWVRSLVALGDIRAIVDSRFEGDFDINSAWKAVEIAIACVSLSPNERPIMSVIVSDLKETLATEIARTKYNSGANSFEPLNVNLSTQLIPHAR 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03831 804 SUPERFAMILY Protein kinase-like (PK-like) 485 768 IPR011009 -
Viun5g03831 804 FunFam Leucine-rich repeat receptor-like protein kinase 475 573 - -
Viun5g03831 804 PANTHER OS07G0107800 PROTEIN-RELATED 2 772 - -
Viun5g03831 804 Pfam Protein tyrosine and serine/threonine kinase 502 767 IPR001245 GO:0004672|GO:0006468
Viun5g03831 804 ProSitePatterns Protein kinases ATP-binding region signature. 505 526 IPR017441 GO:0005524
Viun5g03831 804 CDD STKc_IRAK 505 770 - -
Viun5g03831 804 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 574 781 - -
Viun5g03831 804 ProSiteProfiles Protein kinase domain profile. 499 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03831 804 SUPERFAMILY L domain-like 315 399 - -
Viun5g03831 804 Gene3D Phosphorylase Kinase; domain 1 481 573 - -
Viun5g03831 804 Pfam Malectin-like domain 1 274 IPR024788 -
Viun5g03831 804 SMART serkin_6 499 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03831 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Viun5g03831 804 Gene3D Transferase(Phosphotransferase) domain 1 574 788 - -
Viun5g03831 804 FunFam Leucine-rich repeat receptor-like kinase 285 418 - -
Viun5g03831 804 Gene3D Ribonuclease Inhibitor 288 407 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03831 Viun-Chr5 46832744 46838627 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03831 2 804 Receptor kinase-like Gene Family AT1G51800 47.573 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Viun5g03831 Malectin_like 1.4e-91 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03831 - - vun:114185309 1584.7