Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03826 ATGTGGACGAGATTCTCCGTTGCAGTTTTAGTAGCTGTTCTACTTATTCAAGCTCATGCTCAACCAGGATTCATCAGCATAGATTGCGGAGCTGAAGCAGGTGTGAACTATAATGATTCAATATTTGGCATAAATTACGTTTCGGATGCAGAGTTCATAAATACGGGTGTGAGTGGGACAATAGCATCCGAAGAGATCAACAGATTCAATCAAAAACAACTGCAGAAGCTTAGAAGTTTCCCGGAAGGAAAAAGGAACTGCTACAAAATAAGCGTCACAGGAGGCTCTAAGTACCTCATACGCACGGTTTTTGTGTACGGAAATTATGATGGCCGAAATATGCCACCACAGTTTGATCTTCTGCTCGGACCTAGCCACTGGGATACAGTGACTATAAGCAACGCATCTATTAGCCAATTCAATGAAATCATACATGTACCTTCACTGGATTATGTGCAAATCTGTCTGATTAACACAGGCCATGGTACACCATTTATAACAAACATAGAATTCAGGACTTTGAAAAATGATACATACGTCACTCAATTCGGATCATTGGAACTTTACAATTACTTGCGCTGCGATTTGGGTTCAAACACATCGTACAGGTACCCGGTTGATGTTTATGATCGTATCTGGAATGATCGTTCCTGGTATGCCTGTAACTTCGGCCAAAATTGGAAACCACTAAATGCCTCCATTCCTGATGATTCTTTAAATCAGACGGATTACAAGCCGGGAGCTACTATCATGAGCACCGCAGTTGAACCAGAAAATGATAGTGCTCCGTTGGTAATAAGCTGGCAGCCACAATCTGAAAGCGACCAATTCTATGTCTACATGCACTTCACGGAAACTCAAGTGTTAAACACGAATCAGACAAGACAATTCAACGTCATCAGCAACGGTGAATTAAGTATTCCAAATTTTTCTCCGCAGTACCATAATGTCAGTACCATTACCATATTTTCGACGTCAGCCATCAGCGGGAATGTAATTAATTTTTCACTGGAGAGGACAAAAAATTCTACCCTGCCTCCCATCATCAGTGCCATTGAAATTTACAGAGTAATAGACTTACAGGAACCAGAGACATTCCAAGGAGATGTTGATGCGATTACAAGTATTAAGTCATTTTATGGAGTGAAAAGGGATTGGGAAGGTGATCCATGCGTCCCTGTAGCCTACTGGTGGGATGGTCTCAGCTGTAGTTATGACGGCAACGAGCAGTTCCCAAGAATCACGACTCTGAATTTATCTTCAAGTGGATTGTCAGGAAAGATACACCCTTCTATCTCAAACCTCACCATGTTGGAGAACCTGGATTTATCTAACAATAACTTAAATGGTGAAGTTCCTGATTTTCTGTCTGAGTTACAATACTTGAAGATCTTAAACTTGGAGAAGAATAACCTCTTTGGTTCAATTCCATTGGCACTTGTTGAAAAATCTAAGGAAGGTTCTCTCACCCTAATTTTGGGTCAAAATCCATATGTCTGTGAACATGGTCAATGCATCGAGAACAGAAAGAACATTGTTATGCCTTTAGTAGCATCAATATGCGGGGTTTTGATCCTTCTGGTGGCCGTGGCAGCTATATTGTGGATCCTTGCGAAGAGAAAATCGAAAGAAAAGGATCAAAATGAGATCTCTCAGCTGTACACAGAACAAGATGATTCTTTACAGCAGTTTAAAAAACAAAAATTTTCATACTCTGATGTCAGTAAATTTACCAACAATTTCGGAACAATTGTTGGTAAAGGAGGCTTTGGAACAGTTTTTCTGGGCTATATTTATGACACTCCAATTGCTGTCAAAATGCTTTCCCCTTCATCATGTCGTGGTTATGAACAATTTCAAGCAGAGGTTAAACTTCTAATGAGAGTTCATCATAAAAATCTGACTTCCCTTATTGGTTATTGTAATCAAGGAATCAATAAGAGTCTCATATATGAGTACATGGCTAATGGGAACTTAGAGGAACATCTCTCTGGTAAGCACAGTAAATCAAAATTCTTGAGCTGGGAAGAAAGACTTCGTATAGCAGTGGACGCAGCCTTGGGATTGGAGTATCTGCAAAATGGTTGCAAGCCACCTATAATTCACAGGGACGTAAAATCTTCAAACATCTTGTTGAATGAACATTTCCAAGCGAAATTATCTGATTTTGGTCTATCCAAAATTATCCCAGCTGATGGGAGATCACATGTGTCAACTGTTATCGCTGGTACACCTGGTTATCTGGACCCTGACTATTGCACATCCAATAGATTAACAGAGAAAAGTGATGTTTATAGCTTTGGAGTGGTTCTTTTGGAAATAATCACAGGTCAGAAAGTAATAGCAAGGAATGAAGAAAGGAGTCACATTATTGAATGGGTTAGGTCCCTGGTTGCATTAAGGGATATCATGGCCATTGTGGACTCAAGATTTGAAGGAGATTTTGACATTAACTCAGCCTGGAAAGCCGTGGAAATAGCAATGGCTTGTGTTTCTCTAAGTCCCAAAGAAAGGCCAATAATCAGTGTGATAGTGTTTGAACTTAAGGAGATTTTAGCAACCGAATTAGCTCGAATAAAACATAACAGTTGTGCAAATTCCATGTGA 2607 0.3989 MWTRFSVAVLVAVLLIQAHAQPGFISIDCGAEAGVNYNDSIFGINYVSDAEFINTGVSGTIASEEINRFNQKQLQKLRSFPEGKRNCYKISVTGGSKYLIRTVFVYGNYDGRNMPPQFDLLLGPSHWDTVTISNASISQFNEIIHVPSLDYVQICLINTGHGTPFITNIEFRTLKNDTYVTQFGSLELYNYLRCDLGSNTSYRYPVDVYDRIWNDRSWYACNFGQNWKPLNASIPDDSLNQTDYKPGATIMSTAVEPENDSAPLVISWQPQSESDQFYVYMHFTETQVLNTNQTRQFNVISNGELSIPNFSPQYHNVSTITIFSTSAISGNVINFSLERTKNSTLPPIISAIEIYRVIDLQEPETFQGDVDAITSIKSFYGVKRDWEGDPCVPVAYWWDGLSCSYDGNEQFPRITTLNLSSSGLSGKIHPSISNLTMLENLDLSNNNLNGEVPDFLSELQYLKILNLEKNNLFGSIPLALVEKSKEGSLTLILGQNPYVCEHGQCIENRKNIVMPLVASICGVLILLVAVAAILWILAKRKSKEKDQNEISQLYTEQDDSLQQFKKQKFSYSDVSKFTNNFGTIVGKGGFGTVFLGYIYDTPIAVKMLSPSSCRGYEQFQAEVKLLMRVHHKNLTSLIGYCNQGINKSLIYEYMANGNLEEHLSGKHSKSKFLSWEERLRIAVDAALGLEYLQNGCKPPIIHRDVKSSNILLNEHFQAKLSDFGLSKIIPADGRSHVSTVIAGTPGYLDPDYCTSNRLTEKSDVYSFGVVLLEIITGQKVIARNEERSHIIEWVRSLVALRDIMAIVDSRFEGDFDINSAWKAVEIAMACVSLSPKERPIISVIVFELKEILATELARIKHNSCANSM 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03826 868 ProSiteProfiles Protein kinase domain profile. 579 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03826 868 Gene3D Phosphorylase Kinase; domain 1 561 653 - -
Viun5g03826 868 SUPERFAMILY Protein kinase-like (PK-like) 559 845 IPR011009 -
Viun5g03826 868 Gene3D Ribonuclease Inhibitor 370 489 IPR032675 -
Viun5g03826 868 Pfam Protein tyrosine and serine/threonine kinase 581 845 IPR001245 GO:0004672|GO:0006468
Viun5g03826 868 FunFam Leucine-rich repeat receptor-like kinase 368 501 - -
Viun5g03826 868 ProSitePatterns Serine/Threonine protein kinases active-site signature. 700 712 IPR008271 GO:0004672|GO:0006468
Viun5g03826 868 Gene3D Transferase(Phosphotransferase) domain 1 654 866 - -
Viun5g03826 868 Pfam Malectin-like domain 27 357 IPR024788 -
Viun5g03826 868 ProSitePatterns Protein kinases ATP-binding region signature. 585 606 IPR017441 GO:0005524
Viun5g03826 868 SMART serkin_6 579 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03826 868 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 654 860 - -
Viun5g03826 868 SUPERFAMILY L domain-like 370 480 - -
Viun5g03826 868 CDD STKc_IRAK 585 851 - -
Viun5g03826 868 PANTHER OS07G0107800 PROTEIN-RELATED 25 852 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03826 Viun-Chr5 46793270 46798386 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03826 7 858 Receptor kinase-like Gene Family AT1G51800 46.964 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Viun5g03826 Malectin_like 8.8e-109 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03826 - - vun:114185309 1169.45