Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03823 ATGGCATTCAAACATTTGGCACCCTACGCAATGTCGATGAGTTTCTTCGTTATTTTTCTAGGTTGTCTACTTGTTCAAGCCCAGGATCAATCAGGATTTATCAGCATAGATTGCGGAGCTCCAGCAGACACGGACTACACTGAGCCAAAAACAGGCATCAATTACACATCAGATGCCAATTTCATAGACACGGGTGAAAGTGGGACAATAATACCTGAAACCATCAACACTGTCTATCAACGACAGATGATGAATGTGAGAAGCTTCCCCAAAGGAAAAAGGAACTGCTACAAAATAAGCATCACAAGAGGTTCCACTTATCTCATCCGCACCAATTTTTTGTATGGAAATTACGATAAGCTGAATAAGGCACCAAAGTTTGATATTCATCTCGGGGTTAACCGCTGGTATACAGTGACTATAGACAATGCATCCACTCCTCAAGTCAATGAGATCATACATGTACCTTCACTGGATTATCTGCATATCTGTCTCGTTAACACAGGCCATGGCACACCCTTTATATCAGCTATAGAATTAAGGACTTTGAAAAATGCAACTTACGCCCCTGAATTTGGATCATTGGAATATTACAACCGGTGGGATTTAGGTTCAAAGGACAGCTACAGGTACAATGTTGATGTTTACGACCGTTTCTGGTATAGCTATGGCGACAACAAGGATTGGAAACAAATAAATGCTTCTATTGCTGCTGATTCTTTTGATCAGAATGATTACAGACCGCCAGGAATTGTCATGAGTACCGCAGTTACACCAGTAAATGCGAGTGCCCCTTTGGTAATAAGCTGGGAGCCACAAAATCCAACTGAACAATACTATGTTTACATGCACTTCTTCGAGATCGAAGTGCTAGGGAAGAATCAGACAAGAGAATTCAACATCACCCAGAATGGAAGGCCATGGTATCAAAATTTGTCTCCGTTGCCCCAGAGTATCAACACTATATATAGCAGAGCAGGCATCAGTGGGGAAAAAATTGAATATTCACTTGAGAAAGCCAAGAGTTCAAGCCTTCCTCCCATCTTAAATGCCATTGAAATTTACAGAGTGATAAACTTCCAGCAGACAGATACACACCAAGGAGATGTTGATGCGATTGCAAGCATCAAGTCAGTTTATGGAGTGAAAAGAGATTGGCAAGGTGATCCATGCGCCCCTGTAGCCTACTTGTGGGATGGTCTCAATTGTAGTTATCTAGGCAATAAGAACCCAAGAATCACAACTTTGAATTTATCTTCAAGTGAATTGTCCGGAACAATAGATCCTACGATTTCAAATCTCATCATGTTGGAGCAGTTGGATTTATCCAACAATAACTTATACGGCCAAGTTCCTGATTTTCTATCTAGATTACAACACTTGAAGATGATAAACTTTGAGAACAACAACCTCACTGGTTCAATTCCCGAGGCACTAGTTAAAAAATCTAAGGAAGGTTTCCTGTCACTAAGGGTGGGCCAAAATCCATATCTATGTGAATCCGGTCAATGCAACAAGAAGAGGAAGGAAAAGAAGAATATTGTTATTCCCTTATTATCAACCGTTTGTGGGGTTTTGATCCTTCTGATGACTGTGGCAGCTGTATTGTGGACTCTTGAAAGGAGAAAACCCAGAGCTTCGACCGTAGATCAACGTGAGATCACAGAACAAGATGATTCGTTACATCAACTCAAAAAACAGATATATTCATACTCTGATGTAGTTAGAATCACCAACGAATTCAGTACAATTGTTGGTAAAGGTGGGTTTGGAACAGTTTATCTGGGTTATATTGGTGACACTCCCGTGGCAGTGAAAATGCTGTCTCCATCTTCAGTTCATGGTTATCGACAGTTTCAAGCAGAAGTTAAAATTCTAATGAGGGTTCATCATACAAATCTCACCTCCCTTGTTGGATATTGTAATGACGGAGATTATAAGGGTCTCATATATGAGTACATGGCTAACGGAGACTTAAAACAACATCTTTCTGGTAAACACGGCAAATCAAAATTCTTGAGCTGGGAAGACAGGCTTCGTATAGCAGTGGATGCAGCTCTAGGTGAGGAAGTAAACTTGAAATCATGTGTTTTGTCAAATTGTGAACTCCCTTTTTCCCCTCTCAAAATGTTTACAATGAATCTAATATCAGGATTGGAGTATCTTCAAACTGGTTGCAAGCCTCCTATAATCCACAGAGACATAAAATCTACAAACATCTTGTTGGATGAAAAGTTCCAAGCAAAATTATCAGATTTTGGTCTATCCAAAATTATCCCAATTGATGGGGGAACTCATGTGTCAACTGTTGTTGCTGGTACTCCCGGTTATCTAGACCCAGAGTACTACATATCCAATAGATTAACACAGAAAAGTGATGTTTATAGCTTTGGAGTTGTTCTTTTGGAAATCATCACTTATCAGCCAGTAATAGCAATGAATGAAGAAAGGAGTCACATCACTGAACGGGTGAGATCACTGATCGAAAAAGGGGATATCAAGGCGATTGTTGACTCAAGGTTAGAAGGAGATTTTGACATTAATTCAGCTTGGAAAGTCGTAGAAATAGCAATGGCATGTGTTTCTTTTAATCCTAGTGAAAGGCCAATGGTGAGGATGATAGTGAGTGAACTAAGGGAGACTTTAGCAACAGAATTAGCTCGAACACAACTCATTGATGCCCATCTTACAACAGATTCTATTGAACCGATGGCCATGAATCTGGACACTGAATTCACTCCTCTGGCGAGGTAA 2754 0.402 MAFKHLAPYAMSMSFFVIFLGCLLVQAQDQSGFISIDCGAPADTDYTEPKTGINYTSDANFIDTGESGTIIPETINTVYQRQMMNVRSFPKGKRNCYKISITRGSTYLIRTNFLYGNYDKLNKAPKFDIHLGVNRWYTVTIDNASTPQVNEIIHVPSLDYLHICLVNTGHGTPFISAIELRTLKNATYAPEFGSLEYYNRWDLGSKDSYRYNVDVYDRFWYSYGDNKDWKQINASIAADSFDQNDYRPPGIVMSTAVTPVNASAPLVISWEPQNPTEQYYVYMHFFEIEVLGKNQTREFNITQNGRPWYQNLSPLPQSINTIYSRAGISGEKIEYSLEKAKSSSLPPILNAIEIYRVINFQQTDTHQGDVDAIASIKSVYGVKRDWQGDPCAPVAYLWDGLNCSYLGNKNPRITTLNLSSSELSGTIDPTISNLIMLEQLDLSNNNLYGQVPDFLSRLQHLKMINFENNNLTGSIPEALVKKSKEGFLSLRVGQNPYLCESGQCNKKRKEKKNIVIPLLSTVCGVLILLMTVAAVLWTLERRKPRASTVDQREITEQDDSLHQLKKQIYSYSDVVRITNEFSTIVGKGGFGTVYLGYIGDTPVAVKMLSPSSVHGYRQFQAEVKILMRVHHTNLTSLVGYCNDGDYKGLIYEYMANGDLKQHLSGKHGKSKFLSWEDRLRIAVDAALGEEVNLKSCVLSNCELPFSPLKMFTMNLISGLEYLQTGCKPPIIHRDIKSTNILLDEKFQAKLSDFGLSKIIPIDGGTHVSTVVAGTPGYLDPEYYISNRLTQKSDVYSFGVVLLEIITYQPVIAMNEERSHITERVRSLIEKGDIKAIVDSRLEGDFDINSAWKVVEIAMACVSFNPSERPMVRMIVSELRETLATELARTQLIDAHLTTDSIEPMAMNLDTEFTPLAR 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03823 917 CDD STKc_IRAK 585 878 - -
Viun5g03823 917 PANTHER OS07G0107800 PROTEIN-RELATED 34 882 - -
Viun5g03823 917 FunFam Leucine-rich repeat receptor-like kinase 369 500 - -
Viun5g03823 917 SUPERFAMILY Protein kinase-like (PK-like) 557 876 IPR011009 -
Viun5g03823 917 FunFam Lectin-domain containing receptor kinase A4.3 699 896 - -
Viun5g03823 917 ProSiteProfiles Protein kinase domain profile. 579 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03823 917 ProSitePatterns Serine/Threonine protein kinases active-site signature. 730 742 IPR008271 GO:0004672|GO:0006468
Viun5g03823 917 SUPERFAMILY L domain-like 367 481 - -
Viun5g03823 917 Gene3D Transferase(Phosphotransferase) domain 1 654 897 - -
Viun5g03823 917 SMART serkin_6 579 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03823 917 ProSitePatterns Protein kinases ATP-binding region signature. 585 606 IPR017441 GO:0005524
Viun5g03823 917 Pfam Protein tyrosine and serine/threonine kinase 581 878 IPR001245 GO:0004672|GO:0006468
Viun5g03823 917 Gene3D Ribonuclease Inhibitor 371 487 IPR032675 -
Viun5g03823 917 Gene3D Phosphorylase Kinase; domain 1 562 653 - -
Viun5g03823 917 Pfam Malectin-like domain 36 357 IPR024788 -
Viun5g03823 917 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03823 Viun-Chr5 46776795 46783038 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03823 15 917 Receptor kinase-like Gene Family AT2G19210 46.221 0.0 817
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Viun5g03823 Malectin_like 9.4e-116 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03823 - - gmx:100795183 1472.22