Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03821 ATGGGAACGTTGAGGTGTTTCCTTGTTGGTTTTGTTGGAGGTCTACTTCTTGCTGTTCTGATTCAAGCTCAGGATCAATCAGGATTCATCAGCATAGATTGTGGAGCTCCTGAAGATGTGAGCTATACTGAGTCCAAAACTGGCATAAACTATACTTCAGACGCAAATTTGATCAATACTGGTGTGAGTAAGTCAATAGAATCTGATCTCAGAGGAAAGTATCAACGACAGATGTGGACTGTGAGAAGCTTCCCCGAAGGAAAAAGGAACTGCTACAAAATAAATATCACAAGAGGCTCTAAGTATCTGATCAGGGTTAGTTTTTTGTACGGAAATTATGATGATTTAAATAAGACTCCAGAGTTTGATATTCATCTGGGGGCTAACCGGTGGGGTACAGTGAACATAAACAATGGATCAAATGAAGTGGACATGGAGATCATACATATACCTTCACAAGATTATGTACAAATCTGTCTGGTTGACACAGGCCATGGAACACCATTTATATCAGCCATAGAATTCAGAACTTTGCCTAATAATATTTACGTCACTGAATCCGGATCATTGGAAACTTACATCCGGTGGGATATAGGTTCAAACATCGGCTACAGGTACAAGTACGATGTTTATGATCGTTACTGGAGATACGGCAACATAAATAATTGGACGCAATTAAATGTTTCGATTTCTGCTGATGCTTTAGACCAGAACGTGTACAAACCGCCAGCTATTGTTATGAGCACTGCAGTTACACCTGCAAATGTTAGTGCTCCATTGGTGATAAGCTGGAGGCCAGCTGATCCAACTGAACAGTTCTATGTTTACTTGTACTTCATGGAGATTCAAGAGTTGGCGACGAATCAGACAAGAGAATTCAACATCGTGGAAAATGGTAAACAGAGGTTTTCAAAGTTTTCACCAAGGAATCTTCTTGTCACCACTTTATATAGCTCCTCAGCCTCCAGTGGCAAAGAAATTATATATTCTCTTCAAAAAACCCAAAACTCAACCCTGCCTCCCATCATCAATGCCCTTGAAATTTACAGAGTAATAGATTTCCCGCAATCAGATACGTTCGAAGGAGACGATGATGCTATTACAACCATCAAATCAGTTTATGGGGTGACAAGAAATTGGCAAGGTGATCCATGTGCCCCTGTAGATTACTTGTGGGATGGTTTGAATTGTAGTTATAGCAAAAAAGAGTCTCCAAGAATCACTACTTTGAATTTATCTTCAAGTGGGTTGTCAGGAAAGATAGATCCTTCAATCTCAAACTTCACCATGTTGGAAAAGTTGGATCTATCAAACAATAGCTTAAACGGTGAAATTCCTGATTTTCTGTCTAACTTACAACACTTAAAGATATTAAACTTGAAGAAGAATAACCTCTCTGGTTTAATTCCCTCAGCACTTGTTGAGAAATCTAAGGGAGGTTCTTTGTCACTAAGTGTGGATCAAAATCTCTGTGAATCTGGTCAATGCAACGAGCAGGACAAAGAGAGTGGAAAGAAAAAGAACATTGTTGCACCCTTAGTAGCATCAGTTAGTGGGGTTGTGCTCCTTCTCTTTGTCGTGGCAGCTATATTATGGACTCTTAAAAGGAGAAAAATGAAAGCGTTGATAGTAGAAAAGGATCAAAGTCAGATCTCACCACAAAACACAGAACAAGATGATTTATTAATACCATTCAAAAAACAAATTTATTCGTTCTCCGACATCGTTAAAATAACCAACAATTTCAATACAACTCTCGGTAGAGGAGGATTTGGAACTGTTTATCATGGTCATATCGAAGACACTCCAGTTGCAGTGAAAATGCTTTCCTCATCATCTGTCCAGGGTTTTCAACAATTTCAGGCAGAGGTTAAACTTCTAATGAGAGTTCATCACAAAAATTTAACCTCCCTTGTTGGTTATTGTAATGAAGAAACCAATAAGGGTCTCATATATGAGTACATGGCTAATGGAAACTTACAAGAACATCTCTCTGGTAACCACAGCAAAGCAAAATTCTTCACCTGGGAAGAAAGACTCCGTGTAGCAGTTGATGCAGCCTTAGGTTTGGAGTATCTGCACAATGGTTGCAGGCCGTCCATAATCCACAGAGACATAAAATCTACAAACATATTGTTGAATGAACACTTCCAAGCAAAGTTAGCTGATTTTGGTCTGTCCAAAATTATTCCAACTGAAGGGGGAACTCACGTGTCAACTGTTGTTGCTGGTACTCCTGGTTATCTGGACCCTGAGTACTTCATAACAAACAGATTGACAGAAAAGAGTGATGTTTATAGTTTTGGTGTTGTTCTTTTGGAGATAATCACAAATCAAGCAGTGATAATGAGGGGTGAAGACAGTATTCACATAAGTGACTGGGTGAGATCGTTGGTCGTGAAAGGTGATATGAAGGCCATTGTTGACTCAAGGCTAGAAGGAGATTATGATACCAATTCAGTTTGGAAAGCAGTAGAAATAGCAACAGCATGTGTGTCTTCAAATATGAACAGAAGGCCCGTCACAAGCGAGATAGTGATTGAACTGAAGGAGTCTTTATCAATGGAAGTAGCTAGAACAAAATATAGAGGTAACCATTCAACAGATTTAGGGGTGACCTTGAATATGAATACAGAATTTATTCCTCAAGCTAGGTAA 2658 0.3913 MGTLRCFLVGFVGGLLLAVLIQAQDQSGFISIDCGAPEDVSYTESKTGINYTSDANLINTGVSKSIESDLRGKYQRQMWTVRSFPEGKRNCYKINITRGSKYLIRVSFLYGNYDDLNKTPEFDIHLGANRWGTVNINNGSNEVDMEIIHIPSQDYVQICLVDTGHGTPFISAIEFRTLPNNIYVTESGSLETYIRWDIGSNIGYRYKYDVYDRYWRYGNINNWTQLNVSISADALDQNVYKPPAIVMSTAVTPANVSAPLVISWRPADPTEQFYVYLYFMEIQELATNQTREFNIVENGKQRFSKFSPRNLLVTTLYSSSASSGKEIIYSLQKTQNSTLPPIINALEIYRVIDFPQSDTFEGDDDAITTIKSVYGVTRNWQGDPCAPVDYLWDGLNCSYSKKESPRITTLNLSSSGLSGKIDPSISNFTMLEKLDLSNNSLNGEIPDFLSNLQHLKILNLKKNNLSGLIPSALVEKSKGGSLSLSVDQNLCESGQCNEQDKESGKKKNIVAPLVASVSGVVLLLFVVAAILWTLKRRKMKALIVEKDQSQISPQNTEQDDLLIPFKKQIYSFSDIVKITNNFNTTLGRGGFGTVYHGHIEDTPVAVKMLSSSSVQGFQQFQAEVKLLMRVHHKNLTSLVGYCNEETNKGLIYEYMANGNLQEHLSGNHSKAKFFTWEERLRVAVDAALGLEYLHNGCRPSIIHRDIKSTNILLNEHFQAKLADFGLSKIIPTEGGTHVSTVVAGTPGYLDPEYFITNRLTEKSDVYSFGVVLLEIITNQAVIMRGEDSIHISDWVRSLVVKGDMKAIVDSRLEGDYDTNSVWKAVEIATACVSSNMNRRPVTSEIVIELKESLSMEVARTKYRGNHSTDLGVTLNMNTEFIPQAR 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03821 885 SUPERFAMILY L domain-like 376 475 - -
Viun5g03821 885 FunFam Leucine-rich repeat receptor-like kinase 365 492 - -
Viun5g03821 885 Pfam Malectin-like domain 32 351 IPR024788 -
Viun5g03821 885 CDD STKc_IRAK 586 851 - -
Viun5g03821 885 ProSitePatterns Serine/Threonine protein kinases active-site signature. 701 713 IPR008271 GO:0004672|GO:0006468
Viun5g03821 885 ProSitePatterns Protein kinases ATP-binding region signature. 586 607 IPR017441 GO:0005524
Viun5g03821 885 Pfam Protein tyrosine and serine/threonine kinase 582 848 IPR001245 GO:0004672|GO:0006468
Viun5g03821 885 Gene3D Phosphorylase Kinase; domain 1 567 654 - -
Viun5g03821 885 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 655 862 - -
Viun5g03821 885 Gene3D Ribonuclease Inhibitor 366 482 IPR032675 -
Viun5g03821 885 SUPERFAMILY Protein kinase-like (PK-like) 560 847 IPR011009 -
Viun5g03821 885 Gene3D Transferase(Phosphotransferase) domain 1 655 869 - -
Viun5g03821 885 ProSiteProfiles Protein kinase domain profile. 580 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03821 885 PANTHER OS07G0107800 PROTEIN-RELATED 30 853 - -
Viun5g03821 885 FunFam Leucine-rich repeat receptor-like protein kinase 553 654 - -
Viun5g03821 885 SMART serkin_6 580 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03821 Viun-Chr5 46760499 46765136 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03821 1 885 Receptor kinase-like Gene Family AT1G51800 48.559 0.0 874
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Viun5g03821 Malectin_like 4.2e-115 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03821 - - gmx:100785345 1290.79