Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03819 ATGATCAAGCTTCATCACTGTTCACGACTTCTTCTCACAACATTCTTCAATCTCGTGAAGGTGTTTTCAGCTTTAAACAGTTTAGAAATGAAACGGTACTTTCTACTTCTGATTTTTCAACTCTCTTTAATTCTTCCTATCATTGTTCGTGCTCAGAGTCAATCAGGATTCATCAGCATTGACTGCGGACTTGTGGATGAACCAAGCTACACAGATGAAACTACAGAAATCTATTACTCTTCTGATATCAACTTCACAGACGGTGGTGTAAGCCACAGCATATCATCTACATATAAGGCTTCCCTTGAAAAACAGTTCTGGAATGTTAGAAGCTTCCCCGTTGGAACCAGGCACTGCTATACCCTGGTTTCTCAAGGAAGTGGCAAGAAATATTTAGTGAGGGCAAGGTTTGCATATGGAAGTTACGATGGAAAAGACTCTCTTCCCGAATTTGACATCTATCTGGGAGACAATTGGTGGGGATCAGTGGTGTTTGAGGATGCATCCAGTGTAGTCACCAAGGAAATCATTTATGCTGCTTCCTCAGATTATGTTCATGTCTGTTTATTCAACACTGGAAAGGGTACACCTTTTATTTCAGTTTTAGAGGTTAGAATTCTTAACAGTGATGCCTACCTAGTCAACTATGTGGAGCTCTTGGCAAGGTTTGATGTAGGCTTACAAGATGGTGAAATAGTCAGATTTCCGGATGATGTCTATGATAGAATATGGACACCTTATAACTCAAATGACTGGAAACAGATACATACCCTCCTTACCCTAGACCATGGTGCTACTTCATATAACTTTTTACCATTGCCACCCTCCATTGTCATGGGAACTGCAGCAATTCCAGCAAATGACACGGACAATATAGAGTTCCACTTCCTTCCCAAGCATAATTCTTCCACACTTTATGCGTACATGTTTTTTGCAGAAATCCAGAAGCTTGAGGCAAACCAAATAAGAGAGTTCAACATTTTTGTAAATGGGAGCATTTTAAATATTGATCCAATCAATCCTGTGTACCTGCAGAGTGGGTATAATATAGCTATAAGTGAAAATTCGTTGGAACTTTCGATTAATAAAACTAGTAGATCAACTCTTCCACCTCTTCTCAACGCCATTGAGATATATATGGCAAGAAACTTCTCACAATCAGAAACAAATCAGAAAGATGTTGATGGTATCATAAATGTCAAGTCAATGTATAGAATCAAGAGAAACTGGCAAGGAGATCCTTGTACGCCTCTGGCTTACTTGTGGGAAGGTCTTAACTGCAGCTATGCTGAATCTGGTTCGGCAAAGATTGTATCCTTGAACTTATCTTCCAGTGGTTTAATTGGTAATATAGCTTTTGGCATATCCAATCTGCAGTACATAGAGTATTTGGATTTGTCAAACAACAACTTGACCGGGGCCGTGCCTGAATTCCTTCATCAACTACGCTTCTTAAGAGTTCTAAACCTAGAAAACAATCAGCTATCAGGAACAATTCCAACGCAACTCATTGCACTTTCCCAGAACGGTTCACTTGAATCCTATTTTGGTGGAAATCCAAATCTTTGTACAACAGGCTCATGCAATAAGAATGGGAACAGGGTTGTAGTTCCACTGGTTGCATCGCTGGGAGGAGCTTTTCTGATACTAATAATAGCAGTGATTTCTTTCTGCATACACAAAAAGAGACAACTAGCTCAGCTGAGAAAACAGATGGCCTATTCAAGAATAAAAGAGGAACTAGAGTCTAATAAACAAGAATTCACCTATGCTGAAGTCCTGACAATGACCAAAAATTTTGAAAGAGTTGTAGGGAAAGGAGGATTTGCAACAGTCTACCATGGCCGGATAGATGATACTGAGGTAGCTGTCAAAATGCTCTCTCCTTCATCCCAAGGGTATCTGCAATTTAAGGCAGAGGCCAAATTTGTTGCTGTAGTTCATCATAAATTTTTAACTTCTCTAATAGGATATTGTGATGATAGCGAGCATATGGCTCTCATCTATGAGTATATGGCTAATGGAGACTTGTCAAAACATTTATCAGGCAAAAGCAAAAATATATTGAGTTGGAACCAACGACTTCAAATTGCAGTAGATACTGCAGAAGGATTGGAGTATTTGCATCATGGCTGCAATGCGCCAATTGTTCACAGAGATGTTAAGACTAAAAACATCTTGCTGAATGAAAAATTGAGGGGTAAACTAGGTGATTTTGGGTTGTCAAAGATCTATCCTGATGAAAGTGACACCCATATGATCACAGGGGTAGCCGGAACCCTTGGATATCTTGATCCAGAGTACAATAGATCAAACAGGTTGAAGGCAAAAAGTGATGTTTTCAGTTTTGGAGTAGTTCTGCTTGAGATAATTACAGGTCAACCTGCTATAAGCAAATCTGAAGAGAAAATTCACATAATTCAATGGGTTGATTCTGTGCTACTTGAAAAGGAGATCAAAGATATTGTAGATTCAAGATTGCAGGGAGAATTTGACATTGATTCTGTGAAGAAGGTCTTAGACACTGCAATGGCTTGTGTAGCACCCATTTCTATTAATAGGCCAACCATGAGTCATGTAGTTCAGGAACTGAAACAATGTTTGTCAAACAAGATGATTCTTCCCTTTGACTCTGGAAATCTTAAGAGTTCATCCAACAACTCAATCACTGTCTCCTTTGATGGAATTAGTGGTGAGAGCTCTCTAGTGAGATAG 2715 0.3926 MIKLHHCSRLLLTTFFNLVKVFSALNSLEMKRYFLLLIFQLSLILPIIVRAQSQSGFISIDCGLVDEPSYTDETTEIYYSSDINFTDGGVSHSISSTYKASLEKQFWNVRSFPVGTRHCYTLVSQGSGKKYLVRARFAYGSYDGKDSLPEFDIYLGDNWWGSVVFEDASSVVTKEIIYAASSDYVHVCLFNTGKGTPFISVLEVRILNSDAYLVNYVELLARFDVGLQDGEIVRFPDDVYDRIWTPYNSNDWKQIHTLLTLDHGATSYNFLPLPPSIVMGTAAIPANDTDNIEFHFLPKHNSSTLYAYMFFAEIQKLEANQIREFNIFVNGSILNIDPINPVYLQSGYNIAISENSLELSINKTSRSTLPPLLNAIEIYMARNFSQSETNQKDVDGIINVKSMYRIKRNWQGDPCTPLAYLWEGLNCSYAESGSAKIVSLNLSSSGLIGNIAFGISNLQYIEYLDLSNNNLTGAVPEFLHQLRFLRVLNLENNQLSGTIPTQLIALSQNGSLESYFGGNPNLCTTGSCNKNGNRVVVPLVASLGGAFLILIIAVISFCIHKKRQLAQLRKQMAYSRIKEELESNKQEFTYAEVLTMTKNFERVVGKGGFATVYHGRIDDTEVAVKMLSPSSQGYLQFKAEAKFVAVVHHKFLTSLIGYCDDSEHMALIYEYMANGDLSKHLSGKSKNILSWNQRLQIAVDTAEGLEYLHHGCNAPIVHRDVKTKNILLNEKLRGKLGDFGLSKIYPDESDTHMITGVAGTLGYLDPEYNRSNRLKAKSDVFSFGVVLLEIITGQPAISKSEEKIHIIQWVDSVLLEKEIKDIVDSRLQGEFDIDSVKKVLDTAMACVAPISINRPTMSHVVQELKQCLSNKMILPFDSGNLKSSSNNSITVSFDGISGESSLVR 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03819 904 Gene3D Ribonuclease Inhibitor 397 515 IPR032675 -
Viun5g03819 904 Pfam Protein tyrosine and serine/threonine kinase 600 864 IPR001245 GO:0004672|GO:0006468
Viun5g03819 904 ProSitePatterns Protein kinases ATP-binding region signature. 604 625 IPR017441 GO:0005524
Viun5g03819 904 Pfam Malectin-like domain 60 380 IPR024788 -
Viun5g03819 904 SUPERFAMILY L domain-like 399 524 - -
Viun5g03819 904 FunFam Leucine-rich repeat receptor-like kinase 392 525 - -
Viun5g03819 904 CDD STKc_IRAK 604 866 - -
Viun5g03819 904 Gene3D Transferase(Phosphotransferase) domain 1 672 878 - -
Viun5g03819 904 PANTHER OS07G0107800 PROTEIN-RELATED 58 869 - -
Viun5g03819 904 SUPERFAMILY Protein kinase-like (PK-like) 582 864 IPR011009 -
Viun5g03819 904 ProSiteProfiles Protein kinase domain profile. 598 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03819 904 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 672 874 - -
Viun5g03819 904 SMART serkin_6 598 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03819 904 ProSitePatterns Serine/Threonine protein kinases active-site signature. 716 728 IPR008271 GO:0004672|GO:0006468
Viun5g03819 904 Gene3D Phosphorylase Kinase; domain 1 571 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03819 Viun-Chr5 46739126 46743689 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03819 33 894 Receptor kinase-like Gene Family AT2G19210 46.189 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Viun5g03819 Malectin_like 6.7e-97 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03819 - - gmx:100778537 1405.58