Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03818 ATGATCAAGCTTCATCACTGTTCACGACTTCTTCTCACAACATTCTTCAATCTCGTGAAGGTGTTTTCAGCTTTAAACAGTTTAGAAATGAAACGGTACTTTCTACTTCTGATTTTTCAACTCTCTTTAATTCTTCCTATCATTGTTCGTGCTCAGAGTCAATCAGGATTCATCAGCATTGACTGCGGACTTGTGGATGAACCAAGCTACACAGATGAAACTACAGAAATCTATTACTCTTCTGATATCAACTTCACAGACGGTGGTGTAAGCCACAGCATATCATCTACATATAAGGCTTCCCTTGAAAAACAGTTCTGGAATGTTAGAAGCTTCCCCGTTGGAACCAGGCACTGCTATACCCTGGTTTCTCAAGGAAGTGGCAAGAAATATTTAGTGAGGGCAAGGTTTGCATATGGAAGTTACGATGGAAAAGACTCTCTTCCCGAATTTGACATCTATCTGGGAGACAATTGGTGGGGATCAGTGGTGTTTGAGGATGCATCCAGTGTAGTCACCAAGGAAATCATTTATGCTGCTTCCTCAGATTATGTTCATGTCTGTTTATTCAACACTGGAAAGGGTACACCTTTTATTTCAGTTTTAGAGGTTAGAATTCTTAACAGTGATGCCTACCTAGTCAACTATGTGGAGCTCTTGGCAAGGTTTGATGTAGGCTTACAAGATGGTGAAATAGTCAGATTTCCGGATGATGTCTATGATAGAATATGGACACCTTATAACTCAAATGACTGGAAACAGATACATACCCTCCTTACCCTAGACCATGGTGCTACTTCATATAACTTTTTACCATTGCCACCCTCCATTGTCATGGGAACTGCAGCAATTCCAGCAAATGACACGGACAATATAGAGTTCCACTTCCTTCCCAAGCATAATTCTTCCACACTTTATGCGTACATGTTTTTTGCAGAAATCCAGAAGCTTGAGGCAAACCAAATAAGAGAGTTCAACATTTTTGTAAATGGGAGCATTTTAAATATTGATCCAATCAATCCTGTGTACCTGCAGAGTGGGTATAATATAGCTATAAGTGAAAATTCGTTGGAACTTTCGATTAATAAAACTAGTAGATCAACTCTTCCACCTCTTCTCAACGCCATTGAGATATATATGGCAAGAAACTTCTCACAATCAGAAACAAATCAGAAAGATGTTGATGGTATCATAAATGTCAAGTCAATGTATAGAATCAAGAGAAACTGGCAAGGAGATCCTTGTACGCCTCTGGCTTACTTGTGGGAAGGTCTTAACTGCAGCTATGCTGAATCTGGTTCGGCAAAGATTGTATCCTTGAACTTATCTTCCAGTGGTTTAATTGGTAATATAGCTTTTGGCATATCCAATCTGCAGTACATAGAGTATTTGGATTTGTCAAACAACAACTTGACCGGGGCCGTGCCTGAATTCCTTCATCAACTACGCTTCTTAAGAGTTCTTTTTGGTGGAAATCCAAATCTTTGTACAACAGGCTCATGCAATAAGAATGGGAACAGGGTTGTAGTTCCACTGGTTGCATCGCTGGGAGGAGCTTTTCTGATACTAATAATAGCAGTGATTTCTTTCTGCATACACAAAAAGAGACAACTAGCTCAGCTGAGAAAACAGATGGCCTATTCAAGAATAAAAGAGGAACTAGAGTCTAATAAACAAGAATTCACCTATGCTGAAGTCCTGACAATGACCAAAAATTTTGAAAGAGTTGTAGGGAAAGGAGGATTTGCAACAGTCTACCATGGCCGGATAGATGATACTGAGGTAGCTGTCAAAATGCTCTCTCCTTCATCCCAAGGGTATCTGCAATTTAAGGCAGAGGCCAAATTTGTTGCTGTAGTTCATCATAAATTTTTAACTTCTCTAATAGGATATTGTGATGATAGCGAGCATATGGCTCTCATCTATGAGTATATGGCTAATGGAGACTTGTCAAAACATTTATCAGGCAAAAGCAAAAATATATTGAGTTGGAACCAACGACTTCAAATTGCAGTAGATACTGCAGAAGGATTGGAGTATTTGCATCATGGCTGCAATGCGCCAATTGTTCACAGAGATGTTAAGACTAAAAACATCTTGCTGAATGAAAAATTGAGGGGTAAACTAGGTGATTTTGGGTTGTCAAAGATCTATCCTGATGAAAGTGACACCCATATGATCACAGGGGTAGCCGGAACCCTTGGATATCTTGATCCAGAGTACAATAGATCAAACAGGTTGAAGGCAAAAAGTGATGTTTTCAGTTTTGGAGTAGTTCTGCTTGAGATAATTACAGGTCAACCTGCTATAAGCAAATCTGAAGAGAAAATTCACATAATTCAATGGGTTGATTCTGTGCTACTTGAAAAGGAGATCAAAGATATTGTAGATTCAAGATTGCAGGGAGAATTTGACATTGATTCTGTGAAGAAGGTCTTAGACACTGCAATGGCTTGTGTAGCACCCATTTCTATTAATAGGCCAACCATGAGTCATGTAGTTCAGGAACTGAAACAATGTTTGTCAAACAAGATGATTCTTCCCTTTGACTCTGGAAATCTTAAGAGTTCATCCAACAACTCAATCACTGTCTCCTTTGATGGAATTAGTGGTGAGAGCTCTCTAGTGAGATAG 2634 0.3922 MIKLHHCSRLLLTTFFNLVKVFSALNSLEMKRYFLLLIFQLSLILPIIVRAQSQSGFISIDCGLVDEPSYTDETTEIYYSSDINFTDGGVSHSISSTYKASLEKQFWNVRSFPVGTRHCYTLVSQGSGKKYLVRARFAYGSYDGKDSLPEFDIYLGDNWWGSVVFEDASSVVTKEIIYAASSDYVHVCLFNTGKGTPFISVLEVRILNSDAYLVNYVELLARFDVGLQDGEIVRFPDDVYDRIWTPYNSNDWKQIHTLLTLDHGATSYNFLPLPPSIVMGTAAIPANDTDNIEFHFLPKHNSSTLYAYMFFAEIQKLEANQIREFNIFVNGSILNIDPINPVYLQSGYNIAISENSLELSINKTSRSTLPPLLNAIEIYMARNFSQSETNQKDVDGIINVKSMYRIKRNWQGDPCTPLAYLWEGLNCSYAESGSAKIVSLNLSSSGLIGNIAFGISNLQYIEYLDLSNNNLTGAVPEFLHQLRFLRVLFGGNPNLCTTGSCNKNGNRVVVPLVASLGGAFLILIIAVISFCIHKKRQLAQLRKQMAYSRIKEELESNKQEFTYAEVLTMTKNFERVVGKGGFATVYHGRIDDTEVAVKMLSPSSQGYLQFKAEAKFVAVVHHKFLTSLIGYCDDSEHMALIYEYMANGDLSKHLSGKSKNILSWNQRLQIAVDTAEGLEYLHHGCNAPIVHRDVKTKNILLNEKLRGKLGDFGLSKIYPDESDTHMITGVAGTLGYLDPEYNRSNRLKAKSDVFSFGVVLLEIITGQPAISKSEEKIHIIQWVDSVLLEKEIKDIVDSRLQGEFDIDSVKKVLDTAMACVAPISINRPTMSHVVQELKQCLSNKMILPFDSGNLKSSSNNSITVSFDGISGESSLVR 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03818 877 Gene3D Phosphorylase Kinase; domain 1 544 644 - -
Viun5g03818 877 SMART serkin_6 571 841 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03818 877 SUPERFAMILY Protein kinase-like (PK-like) 555 837 IPR011009 -
Viun5g03818 877 CDD STKc_IRAK 577 839 - -
Viun5g03818 877 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 645 847 - -
Viun5g03818 877 SUPERFAMILY L domain-like 399 496 - -
Viun5g03818 877 ProSiteProfiles Protein kinase domain profile. 571 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03818 877 Gene3D Ribonuclease Inhibitor 397 510 IPR032675 -
Viun5g03818 877 ProSitePatterns Serine/Threonine protein kinases active-site signature. 689 701 IPR008271 GO:0004672|GO:0006468
Viun5g03818 877 Pfam Protein tyrosine and serine/threonine kinase 573 837 IPR001245 GO:0004672|GO:0006468
Viun5g03818 877 ProSitePatterns Protein kinases ATP-binding region signature. 577 598 IPR017441 GO:0005524
Viun5g03818 877 Pfam Malectin-like domain 60 380 IPR024788 -
Viun5g03818 877 PANTHER OS07G0107800 PROTEIN-RELATED 58 842 - -
Viun5g03818 877 Gene3D Transferase(Phosphotransferase) domain 1 645 851 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03818 Viun-Chr5 46739126 46743689 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03818 33 867 Receptor kinase-like Gene Family AT2G19210 44.937 0.0 737
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Viun5g03818 Malectin_like 6.3e-97 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03818 - - gmx:100778537 1357.43