Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03787 ATGGGATTGCAGCTCATTTTCCTGCTAATTAAGCTACATTTTGTTACATGTACACCCCATCTTCATGAATATGCTGCAAGCTATTTGCACCATTCGAGAATCCGAAGCCCTTCAAGCATTGCATTTCCACCCACAGAGTCACCTACTACAGTTCCTGCTGGTACTACACTTCCACCTTCCCAACCATTCCCCAAAAGAAAATGGATGCACAGTTCTATGGACTCTCCAATTCCACGCCACAAGCATCACCATTCCAGAAGAAAGTTCAGCAACCAAGCTCCTGGACCAACCTTTTCAATCAATCCCCATACTCATCAAGGTCCTCCTCCTGTCATCAAATCACAACATTCATTCTCTTCACCTGTAAATGCACCAGCACCAGCACCAATAGTTCTATCACACCACTTGAATGTACCGTATACTTCACCTAGAATTTCACCTCTAGGTTCATCAATGAAGAAGACAAGGACTCCACCAGCAGCATATGCTTTTGTTCTACCATCTCCACCGCCTAACAAAGATTGTATGTCACTGACATGCTCTGAGCCCTTGACATATACACTTCCTGGATCACCTTGTGGTTGTGTTTGGCCACTCCAAGTTAAACTTCGCATCAGCGTTGCAATATACAAGTTTTTTCCTTCGGTTTCAAAGCTGGCCAAAGAAATTGCAGCTAGTGTTTTGCTGAACCGTAATCAAGTACGCATTGTGGGTGCCGATGCAACTACTCAGCAGCTCGAGAAAACTACTGTTCTCATAAACTTGGTGCCCCAAGGAGTGAAATTTGATGATACAACAGCTCTTTTAATATATAAGAAATTCTGGCAGAGAGAGATTCTCAATGATGATTCTACCTTCGGTTCCTATGAAGTGCTCTATGTTCATTATCCAGGTCTTCCACCGTCTCCACCTTCAAATGTTTACGGTATAGATGTTGAACCATACCCTGGTCACGACAACAATGGAACAATAATAAAACCTTTAGGAGTAGATGTCTCAAGGAAGCAAAAAGAAGGGAGTGGTGGAAGAATGCTTATTATGATCATCCTTTCATCTTTTACCGCCTTCCTTCTATTCATTGGACTTGCATGGATTTTTCTCTTGAAGTGTGGTTCCAGCACTCTTGAACCTGGACATATACCAGATGCCAAAATTTCATCCTCTTCAATGCGATCAGGTACTGCCAGTGTTAGGTCATTGACTTATGCGAGCATGCCAGGTTCTAGATCAATGTCCTTCGGTTCTGGAACAATAATCTATGCAGGATCAGCTAAAATATTTTCTTTGAACGAAATCGAGAAAGCAACAAATAACTTCAATTCTTCAAGCATACTAGGAGAAGGTGGCTTCGGTCTTGTTTACAAGGGTGACTTAAATGATGGCAGAGAGGTGGCTGTGAAGATTCTCAAAAGGGATGACCAGCATGGTGACCATGAATTCTTTGCAGAGTCAGAGATGCTTAGCTGCTTGCACCATAGGAATTTAGTTAAACTGATTGGTATATGCACAGAGAAACACACTCGCTGCTTAGTGTATGAGCTTGTTCCTAATGGCAGCGTGGAATCCCACTTACATGGTATGGACAAAGAAACCGAACCACTAGATTGGAATGCCCGGATGAAGATTGCACTTGGTGCAGCTAGAGGATTAACCTATCTGCATGAAGATTGTAATCCATGTGTCATACACAGAGACTTCAAATCCAGCAACATCTTATTGGAATACGATTTTGTACCCAAAGTTTCAGATTTTGGCTTGGCTAGAACAACATTGAACGAGGGAAACAAGCCCGTTTCAACTCATGTTATTGGTACATTTGGCTACGTAGCTCCTGAATATGCAATGACAGGACATCTTCTTGTCAAAAGTGATGTTTACAGCTATGGAGTTGTGCTCCTTGAGCTGCTAAGTGGAAGAAAGCCTGTGGATTTGTCGCAGCCACCAGGACAAGAAAACCTTGTTGCTTGGGCTCGTCCACTTCTTACAAGTAAGGAGGGTTTGCAGAAGATCATAGACCCCATTATGAAGGATAGTGTTTCCATTGATACCATTGTAAAGGTTGCAGCAATTGCATCAATGTGCGTGCAATCAGAAGTCACTCAGCGTCCTTTTATGGGTGAAGTTGTTCAGGCCTTGACATTGGTATGCAGTGAGTTTGAAGAAAAAAGATGA 2172 0.4263 MGLQLIFLLIKLHFVTCTPHLHEYAASYLHHSRIRSPSSIAFPPTESPTTVPAGTTLPPSQPFPKRKWMHSSMDSPIPRHKHHHSRRKFSNQAPGPTFSINPHTHQGPPPVIKSQHSFSSPVNAPAPAPIVLSHHLNVPYTSPRISPLGSSMKKTRTPPAAYAFVLPSPPPNKDCMSLTCSEPLTYTLPGSPCGCVWPLQVKLRISVAIYKFFPSVSKLAKEIAASVLLNRNQVRIVGADATTQQLEKTTVLINLVPQGVKFDDTTALLIYKKFWQREILNDDSTFGSYEVLYVHYPGLPPSPPSNVYGIDVEPYPGHDNNGTIIKPLGVDVSRKQKEGSGGRMLIMIILSSFTAFLLFIGLAWIFLLKCGSSTLEPGHIPDAKISSSSMRSGTASVRSLTYASMPGSRSMSFGSGTIIYAGSAKIFSLNEIEKATNNFNSSSILGEGGFGLVYKGDLNDGREVAVKILKRDDQHGDHEFFAESEMLSCLHHRNLVKLIGICTEKHTRCLVYELVPNGSVESHLHGMDKETEPLDWNARMKIALGAARGLTYLHEDCNPCVIHRDFKSSNILLEYDFVPKVSDFGLARTTLNEGNKPVSTHVIGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDLSQPPGQENLVAWARPLLTSKEGLQKIIDPIMKDSVSIDTIVKVAAIASMCVQSEVTQRPFMGEVVQALTLVCSEFEEKR 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03787 723 MobiDBLite consensus disorder prediction 39 56 - -
Viun5g03787 723 ProSiteProfiles Protein kinase domain profile. 439 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g03787 723 MobiDBLite consensus disorder prediction 39 119 - -
Viun5g03787 723 SUPERFAMILY Protein kinase-like (PK-like) 419 713 IPR011009 -
Viun5g03787 723 ProSitePatterns Protein kinases ATP-binding region signature. 445 467 IPR017441 GO:0005524
Viun5g03787 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 561 573 IPR008271 GO:0004672|GO:0006468
Viun5g03787 723 Gene3D Transferase(Phosphotransferase) domain 1 515 722 - -
Viun5g03787 723 FunFam receptor-like serine/threonine-protein kinase ALE2 412 514 - -
Viun5g03787 723 PANTHER OS01G0750732 PROTEIN 167 719 - -
Viun5g03787 723 MobiDBLite consensus disorder prediction 90 119 - -
Viun5g03787 723 FunFam Receptor-like serine/threonine-protein kinase ALE2 515 723 - -
Viun5g03787 723 Pfam Protein tyrosine and serine/threonine kinase 442 712 IPR001245 GO:0004672|GO:0006468
Viun5g03787 723 Gene3D Phosphorylase Kinase; domain 1 414 514 - -
Viun5g03787 723 CDD STKc_IRAK 445 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03787 Viun-Chr5 46551115 46555080 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03787 81 723 Receptor kinase-like Gene Family AT5G56890 55.456 0.0 670
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Viun5g03787 PK_Tyr_Ser-Thr 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03787 - - gmx:100798578 1203.35